Task 38606570

Name MCL1_A24_A14_r0_2-QUICO_ATM_OpenFF_MCL1-0-6-RND6749_0
Workunit 31560348
Created 14 Apr 2026, 8:09:08 UTC
Sent 14 Apr 2026, 8:11:15 UTC
Report deadline 19 Apr 2026, 8:11:15 UTC
Received 14 Apr 2026, 9:06:57 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID 605003
Run time 2 min 7 sec
CPU time 2 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 50,489.32 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 51.46 MB
Peak swap size 10.31 GB
Peak disk usage 1.42 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<message>
Das Betriebssystem kann <sporadic_ac> nicht ausf�hren.
 (0xc3) - exit code 195 (0xc3)</message>
<stderr_txt>
10:12:52 (56668): wrapper (7.9.26016): starting
10:12:53 (56668): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A24_A14_0.pdb
QB_A24_A14_0.xml
QB_A24_A14.inpcrd
QB_A24_A14_input.yaml
QB_A24_A14.pdb
QB_A24_A14.prmtop
QB_A24_A14_sys.xml
run.bat
run.sh
10:13:05 (56668): Library/usr/bin/tar.exe exited; CPU time 0.000000
10:13:05 (56668): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
ERROR: Exception:
Traceback (most recent call last):
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\cli\base_command.py", line 105, in _run_wrapper
    status = _inner_run()
             ^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\cli\base_command.py", line 96, in _inner_run
    return self.run(options, args)
           ^^^^^^^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\cli\req_command.py", line 67, in wrapper
    return func(self, options, args)
           ^^^^^^^^^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\commands\install.py", line 379, in run
    requirement_set = resolver.resolve(
                      ^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\resolution\resolvelib\resolver.py", line 95, in resolve
    result = self._result = resolver.resolve(
                            ^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_vendor\resolvelib\resolvers.py", line 546, in resolve
    state = resolution.resolve(requirements, max_rounds=max_rounds)
            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_vendor\resolvelib\resolvers.py", line 397, in resolve
    self._add_to_criteria(self.state.criteria, r, parent=None)
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_vendor\resolvelib\resolvers.py", line 173, in _add_to_criteria
    if not criterion.candidates:
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_vendor\resolvelib\structs.py", line 156, in __bool__
    return bool(self._sequence)
           ^^^^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\resolution\resolvelib\found_candidates.py", line 174, in __bool__
    return any(self)
           ^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\resolution\resolvelib\found_candidates.py", line 162, in <genexpr>
    return (c for c in iterator if id(c) not in self._incompatible_ids)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\resolution\resolvelib\found_candidates.py", line 53, in _iter_built
    candidate = func()
                ^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\resolution\resolvelib\factory.py", line 187, in _make_candidate_from_link
    base: Optional[BaseCandidate] = self._make_base_candidate_from_link(
                                    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\resolution\resolvelib\factory.py", line 233, in _make_base_candidate_from_link
    self._link_candidate_cache[link] = LinkCandidate(
                                       ^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\resolution\resolvelib\candidates.py", line 304, in __init__
    super().__init__(
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\resolution\resolvelib\candidates.py", line 159, in __init__
    self.dist = self._prepare()
                ^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\resolution\resolvelib\candidates.py", line 236, in _prepare
    dist = self._prepare_distribution()
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\resolution\resolvelib\candidates.py", line 315, in _prepare_distribution
    return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\operations\prepare.py", line 521, in prepare_linked_requirement
    metadata_dist = self._fetch_metadata_only(req)
                    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\operations\prepare.py", line 373, in _fetch_metadata_only
    return self._fetch_metadata_using_link_data_attr(
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\operations\prepare.py", line 393, in _fetch_metadata_using_link_data_attr
    metadata_file = get_http_url(
                    ^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\operations\prepare.py", line 113, in get_http_url
    hashes.check_against_path(from_path)
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\utils\hashes.py", line 102, in check_against_path
    return self.check_against_file(file)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\utils\hashes.py", line 98, in check_against_file
    return self.check_against_chunks(read_chunks(file))
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\utils\hashes.py", line 80, in check_against_chunks
    for chunk in chunks:
  File "c:\Boinc\005\slots\14\Lib\site-packages\pip\_internal\utils\misc.py", line 314, in read_chunks
    chunk = file.read(size)
            ^^^^^^^^^^^^^^^
MemoryError
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'c:\Boinc\005\slots\14\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Traceback (most recent call last):
  File "<frozen runpy>", line 198, in _run_module_as_main
  File "<frozen runpy>", line 88, in _run_code
  File "c:\Boinc\005\slots\14\Scripts\rbfe_production.exe\__main__.py", line 7, in <module>
  File "c:\Boinc\005\slots\14\Lib\site-packages\atom_openmm\rbfe_production.py", line 29, in rbfe_production
    rx = openmm_job_RBFE(
         ^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\atom_openmm\openmm_async_re.py", line 408, in __init__
    super().__init__(command_file, options)
  File "c:\Boinc\005\slots\14\Lib\site-packages\atom_openmm\openmm_async_re.py", line 23, in __init__
    super().__init__(command_file, options)
  File "c:\Boinc\005\slots\14\Lib\site-packages\atom_openmm\async_re.py", line 51, in __init__
    self.keywords = parse_config(self.command_file)
                    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "c:\Boinc\005\slots\14\Lib\site-packages\atom_openmm\utils\config.py", line 83, in parse_config
    import yaml
ModuleNotFoundError: No module named 'yaml'
10:17:05 (56668): C:/Windows/system32/cmd.exe exited; CPU time 2.015625
10:17:05 (56668): app exit status: 0x16
10:17:05 (56668): called boinc_finish(195)
0 bytes in 0 Free Blocks.
456 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 3406562 bytes.
Dumping objects ->
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Object dump complete.

</stderr_txt>
]]>


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