Task 38604067

Name PTP1B_A01_A04_r0_4-QUICO_ATM_GAFF2_NAGL_PTP1B-3-6-RND9318_0
Workunit 31558243
Created 11 Apr 2026, 11:44:56 UTC
Sent 11 Apr 2026, 11:45:00 UTC
Report deadline 16 Apr 2026, 11:45:00 UTC
Received 11 Apr 2026, 14:38:21 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 609799
Run time 2 hours 53 min 21 sec
CPU time 2 hours 56 min 24 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 31,428.00 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 633.35 MB
Peak swap size 9.80 GB
Peak disk usage 4.14 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:49:30 (21576): wrapper (7.9.26016): starting
13:49:30 (21576): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A01_A04_0.pdb
QB_A01_A04_0.xml
QB_A01_A04.inpcrd
QB_A01_A04_input.yaml
QB_A01_A04.pdb
QB_A01_A04.prmtop
QB_A01_A04_sys.xml
run.bat
run.sh
13:49:31 (21576): Library/usr/bin/tar.exe exited; CPU time 0.000000
13:49:31 (21576): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
16:37:54 (21576): C:/Windows/system32/cmd.exe exited; CPU time 10584.968750
16:37:54 (21576): called boinc_finish(0)
0 bytes in 0 Free Blocks.
536 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 150635467 bytes.
Dumping objects ->
{3835240} normal block at 0x0000021881F01B90, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835229} normal block at 0x0000021881F02140, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835218} normal block at 0x0000021881EB5720, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835207} normal block at 0x0000021881EB56B0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835196} normal block at 0x0000021881EB5640, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835165} normal block at 0x0000021883B8B840, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835154} normal block at 0x0000021881EFF550, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835151} normal block at 0x0000021881EAE0D0, 8 bytes long.
 Data: <  &#229;     > 00 00 E5 81 18 02 00 00 
{3834550} normal block at 0x0000021881F00B40, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833965} normal block at 0x0000021881EAE210, 8 bytes long.
 Data: < &#218;&#233;     > 20 DA E9 81 18 02 00 00 
..\zip\boinc_zip.cpp(122) : {314} normal block at 0x0000021881EA0E10, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000021881EA2530, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{298} normal block at 0x0000021881EB5F70, 16 bytes long.
 Data: < o&#235;             > 88 6F EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000021881EB5F20, 16 bytes long.
 Data: <`o&#235;             > 60 6F EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000021881EB0370, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{295} normal block at 0x0000021881EB64C0, 16 bytes long.
 Data: <8o&#235;             > 38 6F EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000021881EB6470, 16 bytes long.
 Data: < o&#235;             > 10 6F EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000021881EB6600, 16 bytes long.
 Data: <&#232;n&#235;             > E8 6E EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000021881EB5CF0, 16 bytes long.
 Data: <&#192;n&#235;             > C0 6E EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000021881EB5250, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{290} normal block at 0x0000021881EB66F0, 16 bytes long.
 Data: <x&#245;&#233;             > 78 F5 E9 81 18 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000021881EB0130, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{288} normal block at 0x0000021881EB6BF0, 16 bytes long.
 Data: <P&#245;&#233;             > 50 F5 E9 81 18 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000021881EB6420, 16 bytes long.
 Data: <(&#245;&#233;             > 28 F5 E9 81 18 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000021881EB65B0, 16 bytes long.
 Data: < &#245;&#233;             > 00 F5 E9 81 18 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000021881EB69C0, 16 bytes long.
 Data: <&#216;&#244;&#233;             > D8 F4 E9 81 18 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000021881EB5ED0, 16 bytes long.
 Data: <&#176;&#244;&#233;             > B0 F4 E9 81 18 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000021881EB6BA0, 16 bytes long.
 Data: < &#244;&#233;             > 88 F4 E9 81 18 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000021881EAFE30, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{280} normal block at 0x0000021881EB6B50, 16 bytes long.
 Data: <`&#244;&#233;             > 60 F4 E9 81 18 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000021881E9F460, 320 bytes long.
 Data: <Pk&#235;     0&#254;&#234;     > 50 6B EB 81 18 02 00 00 30 FE EA 81 18 02 00 00 
{278} normal block at 0x0000021881EB6510, 16 bytes long.
 Data: <&#160;n&#235;             > A0 6E EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000021881EB6290, 16 bytes long.
 Data: <xn&#235;             > 78 6E EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000021881EAF8F0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{275} normal block at 0x0000021881EB5CA0, 16 bytes long.
 Data: <Pn&#235;             > 50 6E EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000021881EAFC50, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{273} normal block at 0x0000021881EB6650, 16 bytes long.
 Data: < m&#235;             > 98 6D EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000021881EB5D40, 16 bytes long.
 Data: <pm&#235;             > 70 6D EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000021881EB6240, 16 bytes long.
 Data: <Hm&#235;             > 48 6D EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000021881EB6380, 16 bytes long.
 Data: < m&#235;             > 20 6D EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000021881EB6AB0, 16 bytes long.
 Data: <&#248;l&#235;             > F8 6C EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000021881EB6150, 16 bytes long.
 Data: <&#208;l&#235;             > D0 6C EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000021881EB5E30, 16 bytes long.
 Data: <&#224;Q&#235;             > E0 51 EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000021881EB51E0, 40 bytes long.
 Data: <0^&#235;     @&#184;&#184;&#131;    > 30 5E EB 81 18 02 00 00 40 B8 B8 83 18 02 00 00 
{264} normal block at 0x0000021881EB6830, 16 bytes long.
 Data: <&#176;l&#235;             > B0 6C EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000021881EB6100, 16 bytes long.
 Data: < l&#235;             > 88 6C EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000021881EB01F0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{261} normal block at 0x0000021881EB5E80, 16 bytes long.
 Data: <`l&#235;             > 60 6C EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000021881EB6C60, 992 bytes long.
 Data: < ^&#235;     &#240; &#235;     > 80 5E EB 81 18 02 00 00 F0 01 EB 81 18 02 00 00 
{96} normal block at 0x0000021881EAFB90, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{95} normal block at 0x0000021881EAE170, 16 bytes long.
 Data: <P &#235;             > 50 11 EB 81 18 02 00 00 00 00 00 00 00 00 00 00 
{94} normal block at 0x0000021881EB1150, 40 bytes long.
 Data: <p&#225;&#234;      &#251;&#234;     > 70 E1 EA 81 18 02 00 00 90 FB EA 81 18 02 00 00 
{73} normal block at 0x0000021881EAE120, 16 bytes long.
 Data: < &#234;&#209; &#247;           > 80 EA D1 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000021881EADEA0, 16 bytes long.
 Data: <@&#233;&#209; &#247;           > 40 E9 D1 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000021881EAE1C0, 16 bytes long.
 Data: <&#248;W&#206; &#247;           > F8 57 CE 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000021881EAE350, 16 bytes long.
 Data: <&#216;W&#206; &#247;           > D8 57 CE 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000021881EADFE0, 16 bytes long.
 Data: <P &#206; &#247;           > 50 04 CE 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000021881EAD9A0, 16 bytes long.
 Data: <0 &#206; &#247;           > 30 04 CE 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000021881EAE030, 16 bytes long.
 Data: <&#224; &#206; &#247;           > E0 02 CE 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000021881EADAE0, 16 bytes long.
 Data: <  &#206; &#247;           > 10 04 CE 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000021881EAE490, 16 bytes long.
 Data: <p &#206; &#247;           > 70 04 CE 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000021881EAD950, 16 bytes long.
 Data: < &#192;&#204; &#247;           > 18 C0 CC 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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