Task 38583807

Name JNK1_A28_A21_r1_1-QUICO_ATM_GAFF2_LOMAP_JNK1_2-1-5-RND4514_2
Workunit 31547834
Created 14 Dec 2025, 17:58:34 UTC
Sent 14 Dec 2025, 17:58:42 UTC
Report deadline 19 Dec 2025, 17:58:42 UTC
Received 15 Dec 2025, 0:47:58 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 613630
Run time 6 hours 10 min 44 sec
CPU time 6 hours 10 min 44 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 53,036.11 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 734.52 MB
Peak swap size 7.25 GB
Peak disk usage 3.10 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
10:06:04 (12116): wrapper (7.9.26016): starting
10:06:04 (12116): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A28_A21_0.pdb
QB_A28_A21_0.xml
QB_A28_A21_equil.pdb
QB_A28_A21.inpcrd
QB_A28_A21_input.yaml
QB_A28_A21_mdlambda.pdb
QB_A28_A21_min.pdb
QB_A28_A21_npt.pdb
QB_A28_A21_out_merged_nowater.pdb
QB_A28_A21.pdb
QB_A28_A21.prmtop
QB_A28_A21_sys.xml
QB_A28_A21_therm.pdb
run.bat
run.sh
10:06:06 (12116): Library/usr/bin/tar.exe exited; CPU time 0.000000
10:06:06 (12116): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835573} normal block at 0x000001C7AE74DEB0, 8 bytes long.
 Data: <        > 00 00 C2 AE C7 01 00 00 
..\lib\diagnostics_win.cpp(417) : {3833962} normal block at 0x000001C7AE73D7A0, 1080 bytes long.
 Data: < L              > C0 4C 00 00 CD CD CD CD B8 00 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x000001C7AE740E20, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2025 Universitat Pompeu Fabra