Task 38583624

Name JNK1_A21_A33_r3_1-QUICO_ATM_GAFF2_LOMAP_JNK1_2-1-5-RND7351_1
Workunit 31547607
Created 14 Dec 2025, 10:56:47 UTC
Sent 14 Dec 2025, 10:56:55 UTC
Report deadline 19 Dec 2025, 10:56:55 UTC
Received 15 Dec 2025, 6:28:35 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 648095
Run time 5 hours 59 min 22 sec
CPU time 5 hours 58 min 19 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 29,151.18 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 690.47 MB
Peak swap size 6.89 GB
Peak disk usage 3.93 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
18:29:41 (13152): wrapper (7.9.26016): starting
18:29:41 (13152): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A21_A33_0.pdb
QB_A21_A33_0.xml
QB_A21_A33_equil.pdb
QB_A21_A33.inpcrd
QB_A21_A33_input.yaml
QB_A21_A33_mdlambda.pdb
QB_A21_A33_min.pdb
QB_A21_A33_npt.pdb
QB_A21_A33_out_merged_nowater.pdb
QB_A21_A33.pdb
QB_A21_A33.prmtop
QB_A21_A33_sys.xml
QB_A21_A33_therm.pdb
run.bat
run.sh
18:29:42 (13152): Library/usr/bin/tar.exe exited; CPU time 0.000000
18:29:42 (13152): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835477} normal block at 0x0000013E8B82CF70, 8 bytes long.
 Data: <  _ >   > 00 00 5F 8D 3E 01 00 00 
..\lib\diagnostics_win.cpp(417) : {3833952} normal block at 0x0000013E8B81D330, 1080 bytes long.
 Data: < ;              > 1C 3B 00 00 CD CD CD CD A0 02 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {308} normal block at 0x0000013E8B820EA0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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