Task 38583585

Name HIF2A_A29_A22_r0_2-QUICO_ATM_GAFF2_LOMAP_HIF2A-2-5-RND7915_0
Workunit 31547681
Created 14 Dec 2025, 9:37:48 UTC
Sent 14 Dec 2025, 9:37:50 UTC
Report deadline 19 Dec 2025, 9:37:50 UTC
Received 14 Dec 2025, 18:42:57 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 638240
Run time 8 hours 15 min
CPU time 7 hours 55 min 55 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 15,212.38 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 482.99 MB
Peak swap size 12.50 GB
Peak disk usage 3.24 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
02:28:24 (18868): wrapper (7.9.26016): starting
02:28:24 (18868): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A29_A22_0.pdb
QB_A29_A22_0.xml
QB_A29_A22_equil.pdb
QB_A29_A22.inpcrd
QB_A29_A22_input.yaml
QB_A29_A22_mdlambda.pdb
QB_A29_A22_min.pdb
QB_A29_A22_npt.pdb
QB_A29_A22.pdb
QB_A29_A22.prmtop
QB_A29_A22_sys.xml
QB_A29_A22_therm.pdb
run.bat
run.sh
02:28:25 (18868): Library/usr/bin/tar.exe exited; CPU time 0.000000
02:28:25 (18868): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
10:42:17 (18868): C:/Windows/system32/cmd.exe exited; CPU time 28555.578125
10:42:17 (18868): called boinc_finish(0)
0 bytes in 0 Free Blocks.
726 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 439952489 bytes.
Dumping objects ->
{3835322} normal block at 0x000001ADBD4FCE80, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835311} normal block at 0x000001ADBD4A4CA0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835300} normal block at 0x000001ADBD4A4AE0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835289} normal block at 0x000001ADBD4A4A70, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835278} normal block at 0x000001ADBD4A48B0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835247} normal block at 0x000001ADBF28ACC0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835236} normal block at 0x000001ADBF29D900, 235 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835233} normal block at 0x000001ADBD49CFA0, 8 bytes long.
 Data: <  &#151;&#189;&#173;   > 00 00 97 BD AD 01 00 00 
{3834591} normal block at 0x000001ADBF29DBB0, 235 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833957} normal block at 0x000001ADBD49DC70, 8 bytes long.
 Data: <&#224;&#212;H&#189;&#173;   > E0 D4 48 BD AD 01 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x000001ADBD490EB0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001ADBD4920B0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x000001ADBD4A5FC0, 16 bytes long.
 Data: < dJ&#189;&#173;           > 98 64 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001ADBD4A5F70, 16 bytes long.
 Data: <pdJ&#189;&#173;           > 70 64 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001ADBD4A1160, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x000001ADBD4A5610, 16 bytes long.
 Data: <HdJ&#189;&#173;           > 48 64 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001ADBD4A5ED0, 16 bytes long.
 Data: < dJ&#189;&#173;           > 20 64 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001ADBD4A55C0, 16 bytes long.
 Data: <&#248;cJ&#189;&#173;           > F8 63 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001ADBD4A56B0, 16 bytes long.
 Data: <&#208;cJ&#189;&#173;           > D0 63 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001ADBD4A47D0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x000001ADBD4A54D0, 16 bytes long.
 Data: <&#184; I&#189;&#173;           > B8 04 49 BD AD 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001ADBD4A09E0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x000001ADBD4A53E0, 16 bytes long.
 Data: <  I&#189;&#173;           > 90 04 49 BD AD 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001ADBD4A5D40, 16 bytes long.
 Data: <h I&#189;&#173;           > 68 04 49 BD AD 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001ADBD4A5390, 16 bytes long.
 Data: <@ I&#189;&#173;           > 40 04 49 BD AD 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001ADBD4A5F20, 16 bytes long.
 Data: <  I&#189;&#173;           > 18 04 49 BD AD 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001ADBD4A52A0, 16 bytes long.
 Data: <&#240; I&#189;&#173;           > F0 03 49 BD AD 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001ADBD4A5570, 16 bytes long.
 Data: <&#200; I&#189;&#173;           > C8 03 49 BD AD 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001ADBD4A0740, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x000001ADBD4A51B0, 16 bytes long.
 Data: <&#160; I&#189;&#173;           > A0 03 49 BD AD 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001ADBD4903A0, 320 bytes long.
 Data: <&#176;QJ&#189;&#173;   @ J&#189;&#173;   > B0 51 4A BD AD 01 00 00 40 07 4A BD AD 01 00 00 
{274} normal block at 0x000001ADBD4A5750, 16 bytes long.
 Data: <&#176;cJ&#189;&#173;           > B0 63 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001ADBD4A5A70, 16 bytes long.
 Data: < cJ&#189;&#173;           > 88 63 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001ADBD4A10A0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x000001ADBD4A6100, 16 bytes long.
 Data: <`cJ&#189;&#173;           > 60 63 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001ADBD4A0FE0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x000001ADBD4A52F0, 16 bytes long.
 Data: <&#168;bJ&#189;&#173;           > A8 62 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001ADBD4A5480, 16 bytes long.
 Data: < bJ&#189;&#173;           > 80 62 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001ADBD4A5A20, 16 bytes long.
 Data: <XbJ&#189;&#173;           > 58 62 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001ADBD4A5C00, 16 bytes long.
 Data: <0bJ&#189;&#173;           > 30 62 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001ADBD4A59D0, 16 bytes long.
 Data: < bJ&#189;&#173;           > 08 62 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001ADBD4A5520, 16 bytes long.
 Data: <&#224;aJ&#189;&#173;           > E0 61 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001ADBD4A5250, 16 bytes long.
 Data: <&#160;EJ&#189;&#173;           > A0 45 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001ADBD4A45A0, 40 bytes long.
 Data: <PRJ&#189;&#173;   &#192;&#172;(&#191;&#173;   > 50 52 4A BD AD 01 00 00 C0 AC 28 BF AD 01 00 00 
{260} normal block at 0x000001ADBD4A5700, 16 bytes long.
 Data: <&#192;aJ&#189;&#173;           > C0 61 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001ADBD4A6010, 16 bytes long.
 Data: < aJ&#189;&#173;           > 98 61 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001ADBD4A0980, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x000001ADBD4A5340, 16 bytes long.
 Data: <paJ&#189;&#173;           > 70 61 4A BD AD 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001ADBD4A6170, 992 bytes long.
 Data: <@SJ&#189;&#173;    	J&#189;&#173;   > 40 53 4A BD AD 01 00 00 80 09 4A BD AD 01 00 00 
{92} normal block at 0x000001ADBD4A1520, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x000001ADBD49D7C0, 16 bytes long.
 Data: <P&#196;H&#189;&#173;           > 50 C4 48 BD AD 01 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x000001ADBD48C450, 40 bytes long.
 Data: <&#192;&#215;I&#189;&#173;     J&#189;&#173;   > C0 D7 49 BD AD 01 00 00 20 15 4A BD AD 01 00 00 
{69} normal block at 0x000001ADBD49D180, 16 bytes long.
 Data: < &#234;]O&#246;           > 80 EA 5D 4F F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001ADBD49DCC0, 16 bytes long.
 Data: <@&#233;]O&#246;           > 40 E9 5D 4F F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001ADBD49DC20, 16 bytes long.
 Data: <&#248;WZO&#246;           > F8 57 5A 4F F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001ADBD49DA90, 16 bytes long.
 Data: <&#216;WZO&#246;           > D8 57 5A 4F F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001ADBD49CF50, 16 bytes long.
 Data: <P ZO&#246;           > 50 04 5A 4F F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001ADBD49DBD0, 16 bytes long.
 Data: <0 ZO&#246;           > 30 04 5A 4F F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001ADBD49D450, 16 bytes long.
 Data: <&#224; ZO&#246;           > E0 02 5A 4F F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001ADBD49DB30, 16 bytes long.
 Data: <  ZO&#246;           > 10 04 5A 4F F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001ADBD49D220, 16 bytes long.
 Data: <p ZO&#246;           > 70 04 5A 4F F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001ADBD49CF00, 16 bytes long.
 Data: < &#192;XO&#246;           > 18 C0 58 4F F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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