Task 38583471

Name JNK1_A24_A14_r3_1-QUICO_ATM_GAFF2_LOMAP_JNK1_2-0-5-RND2962_1
Workunit 31545204
Created 14 Dec 2025, 6:14:29 UTC
Sent 14 Dec 2025, 6:14:31 UTC
Report deadline 19 Dec 2025, 6:14:31 UTC
Received 16 Dec 2025, 16:51:25 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 621414
Run time 13 hours 9 min 10 sec
CPU time 5 hours 39 min 57 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 5,159.61 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 671.32 MB
Peak swap size 2.94 GB
Peak disk usage 3.10 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
02:48:53 (20312): wrapper (7.9.26016): starting
02:48:53 (20312): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A24_A14_0.pdb
QB_A24_A14_0.xml
QB_A24_A14_equil.pdb
QB_A24_A14.inpcrd
QB_A24_A14_input.yaml
QB_A24_A14_mdlambda.pdb
QB_A24_A14_min.pdb
QB_A24_A14_npt.pdb
QB_A24_A14_out_merged_nowater.pdb
QB_A24_A14.pdb
QB_A24_A14.prmtop
QB_A24_A14_sys.xml
QB_A24_A14_therm.pdb
run.bat
run.sh
02:48:56 (20312): Library/usr/bin/tar.exe exited; CPU time 0.015625
02:48:56 (20312): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\6\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\6\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835098} normal block at 0x0000026672837260, 8 bytes long.
 Data: <  zrf   > 00 00 7A 72 66 02 00 00 
..\lib\diagnostics_win.cpp(417) : {3833946} normal block at 0x00000266744554B0, 1080 bytes long.
 Data: <                > B0 15 00 00 CD CD CD CD E8 02 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {305} normal block at 0x000002667283D2A0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
16:53:07 (9036): wrapper (7.9.26016): starting
16:53:07 (9036): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
Ya existe el subdirectorio o el archivo C:\ProgramData\BOINC\slots\6\tmp.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1450} normal block at 0x000001FA79452B00, 8 bytes long.
 Data: <   z    > 00 00 D5 7A FA 01 00 00 
..\lib\diagnostics_win.cpp(417) : {298} normal block at 0x000001FA79453490, 1080 bytes long.
 Data: <        L       > 8C 12 00 00 CD CD CD CD 4C 01 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2025 Universitat Pompeu Fabra