Task 38583451

Name HIF2A_A41_A08_r0_3-QUICO_ATM_GAFF2_LOMAP_HIF2A-4-5-RND2790_0
Workunit 31547584
Created 14 Dec 2025, 5:37:27 UTC
Sent 14 Dec 2025, 5:37:33 UTC
Report deadline 19 Dec 2025, 5:37:33 UTC
Received 14 Dec 2025, 16:22:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 648092
Run time 1 hours 48 min 35 sec
CPU time 1 hours 48 min 35 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 35,706.26 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 490.35 MB
Peak swap size 12.60 GB
Peak disk usage 2.96 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:23:47 (4312): wrapper (7.9.26016): starting
08:23:47 (4312): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A41_A08_0.pdb
QB_A41_A08_0.xml
QB_A41_A08_equil.pdb
QB_A41_A08.inpcrd
QB_A41_A08_input.yaml
QB_A41_A08_mdlambda.pdb
QB_A41_A08_min.pdb
QB_A41_A08_npt.pdb
QB_A41_A08.pdb
QB_A41_A08.prmtop
QB_A41_A08_sys.xml
QB_A41_A08_therm.pdb
run.bat
run.sh
08:23:48 (4312): Library/usr/bin/tar.exe exited; CPU time 0.000000
08:23:48 (4312): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
10:09:33 (4312): C:/Windows/system32/cmd.exe exited; CPU time 6515.390625
10:09:33 (4312): called boinc_finish(0)
0 bytes in 0 Free Blocks.
726 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 92405951 bytes.
Dumping objects ->
{3835566} normal block at 0x0000024D89513D30, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835555} normal block at 0x0000024D89513DA0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835544} normal block at 0x0000024D89513E80, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835533} normal block at 0x0000024D89513C50, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835522} normal block at 0x0000024D89513CC0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835491} normal block at 0x0000024D8B258AF0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835480} normal block at 0x0000024D8B2B42D0, 235 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835477} normal block at 0x0000024D8950CDF0, 8 bytes long.
 Data: <  &#146;&#137;M   > 00 00 92 89 4D 02 00 00 
{3834701} normal block at 0x0000024D89514310, 235 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833953} normal block at 0x0000024D8950D340, 8 bytes long.
 Data: < &#234;^&#137;M   > 10 EA 5E 89 4D 02 00 00 
..\zip\boinc_zip.cpp(122) : {308} normal block at 0x0000024D89500790, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000024D895020F0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{292} normal block at 0x0000024D895152A0, 16 bytes long.
 Data: <h\Q&#137;M           > 68 5C 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000024D89515160, 16 bytes long.
 Data: <@\Q&#137;M           > 40 5C 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000024D89510CC0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{289} normal block at 0x0000024D89515110, 16 bytes long.
 Data: < \Q&#137;M           > 18 5C 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000024D895150C0, 16 bytes long.
 Data: <&#240;[Q&#137;M           > F0 5B 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000024D89514C60, 16 bytes long.
 Data: <&#200;[Q&#137;M           > C8 5B 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000024D89514D50, 16 bytes long.
 Data: <&#160;[Q&#137;M           > A0 5B 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000024D894FD8D0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{284} normal block at 0x0000024D895147B0, 16 bytes long.
 Data: <&#248;&#238;O&#137;M           > F8 EE 4F 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000024D89510360, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{282} normal block at 0x0000024D89514580, 16 bytes long.
 Data: <&#208;&#238;O&#137;M           > D0 EE 4F 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000024D89515250, 16 bytes long.
 Data: <&#168;&#238;O&#137;M           > A8 EE 4F 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000024D89515070, 16 bytes long.
 Data: < &#238;O&#137;M           > 80 EE 4F 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000024D89514F30, 16 bytes long.
 Data: <X&#238;O&#137;M           > 58 EE 4F 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000024D89515430, 16 bytes long.
 Data: <0&#238;O&#137;M           > 30 EE 4F 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000024D89514670, 16 bytes long.
 Data: < &#238;O&#137;M           > 08 EE 4F 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000024D895107E0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{274} normal block at 0x0000024D895153E0, 16 bytes long.
 Data: <&#224;&#237;O&#137;M           > E0 ED 4F 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000024D894FEDE0, 320 bytes long.
 Data: <&#224;SQ&#137;M   &#224; Q&#137;M   > E0 53 51 89 4D 02 00 00 E0 07 51 89 4D 02 00 00 
{272} normal block at 0x0000024D89514C10, 16 bytes long.
 Data: < [Q&#137;M           > 80 5B 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000024D89514B20, 16 bytes long.
 Data: <X[Q&#137;M           > 58 5B 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000024D895104E0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{269} normal block at 0x0000024D89514E40, 16 bytes long.
 Data: <0[Q&#137;M           > 30 5B 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000024D89511080, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{267} normal block at 0x0000024D89514AD0, 16 bytes long.
 Data: <xZQ&#137;M           > 78 5A 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000024D89514BC0, 16 bytes long.
 Data: <PZQ&#137;M           > 50 5A 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000024D89514E90, 16 bytes long.
 Data: <(ZQ&#137;M           > 28 5A 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000024D89514A80, 16 bytes long.
 Data: < ZQ&#137;M           > 00 5A 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000024D89514DA0, 16 bytes long.
 Data: <&#216;YQ&#137;M           > D8 59 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000024D89514940, 16 bytes long.
 Data: <&#176;YQ&#137;M           > B0 59 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000024D89514EE0, 16 bytes long.
 Data: <&#160;&#194;O&#137;M           > A0 C2 4F 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000024D894FC2A0, 40 bytes long.
 Data: <&#224;NQ&#137;M   &#240;&#138;%&#139;M   > E0 4E 51 89 4D 02 00 00 F0 8A 25 8B 4D 02 00 00 
{258} normal block at 0x0000024D895152F0, 16 bytes long.
 Data: < YQ&#137;M           > 90 59 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000024D895154D0, 16 bytes long.
 Data: <hYQ&#137;M           > 68 59 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000024D89510EA0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{255} normal block at 0x0000024D89514620, 16 bytes long.
 Data: <@YQ&#137;M           > 40 59 51 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x0000024D89515940, 992 bytes long.
 Data: < FQ&#137;M   &#160; Q&#137;M   > 20 46 51 89 4D 02 00 00 A0 0E 51 89 4D 02 00 00 
{90} normal block at 0x0000024D89511020, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{89} normal block at 0x0000024D8950D2F0, 16 bytes long.
 Data: <P&#185;O&#137;M           > 50 B9 4F 89 4D 02 00 00 00 00 00 00 00 00 00 00 
{88} normal block at 0x0000024D894FB950, 40 bytes long.
 Data: <&#240;&#210;P&#137;M     Q&#137;M   > F0 D2 50 89 4D 02 00 00 20 10 51 89 4D 02 00 00 
{67} normal block at 0x0000024D8950CFD0, 16 bytes long.
 Data: < &#234;}6&#247;           > 80 EA 7D 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000024D8950CEE0, 16 bytes long.
 Data: <@&#233;}6&#247;           > 40 E9 7D 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000024D8950CE90, 16 bytes long.
 Data: <&#248;Wz6&#247;           > F8 57 7A 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000024D8950D020, 16 bytes long.
 Data: <&#216;Wz6&#247;           > D8 57 7A 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000024D8950D0C0, 16 bytes long.
 Data: <P z6&#247;           > 50 04 7A 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000024D8950D570, 16 bytes long.
 Data: <0 z6&#247;           > 30 04 7A 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000024D8950D9D0, 16 bytes long.
 Data: <&#224; z6&#247;           > E0 02 7A 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000024D8950D7A0, 16 bytes long.
 Data: <  z6&#247;           > 10 04 7A 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000024D8950D430, 16 bytes long.
 Data: <p z6&#247;           > 70 04 7A 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000024D8950D070, 16 bytes long.
 Data: < &#192;x6&#247;           > 18 C0 78 36 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2025 Universitat Pompeu Fabra