Task 38583322

Name PFKFB3_A28_A32_r0_2-QUICO_ATM_GAFF2_LOMAP_PFKFB3-2-5-RND5264_0
Workunit 31547469
Created 14 Dec 2025, 1:29:34 UTC
Sent 14 Dec 2025, 1:29:46 UTC
Report deadline 19 Dec 2025, 1:29:46 UTC
Received 14 Dec 2025, 7:42:47 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID 595174
Run time 6 min 47 sec
CPU time 1 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 2,723.28 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
x86_64-pc-linux-gnu
Peak working set size 43.07 MB
Peak swap size 54.42 MB
Peak disk usage 2.87 GB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
2025-12-14 08:31:03 (15829): wrapper (8.1.26018): starting
2025-12-14 08:31:22 (15829): wrapper: running bin/python (bin/conda-unpack)
2025-12-14 08:31:22 (15829): wrapper: created child process 15836
2025-12-14 08:31:23 (15829): bin/python exited; CPU time 0.078196
2025-12-14 08:31:23 (15829): wrapper: running bin/tar (xjvf input.tar.bz2)
2025-12-14 08:31:23 (15829): wrapper: created child process 15837
2025-12-14 08:31:25 (15829): bin/tar exited; CPU time 1.090444
2025-12-14 08:31:25 (15829): wrapper: running bin/bash (run.sh)
2025-12-14 08:31:25 (15829): wrapper: created child process 15840
+ echo 'Setup environment'
+ source bin/activate
++ _conda_pack_activate
++ local _CONDA_SHELL_FLAVOR
++ '[' -n x ']'
++ _CONDA_SHELL_FLAVOR=bash
++ local script_dir
++ case "$_CONDA_SHELL_FLAVOR" in
+++ dirname bin/activate
++ script_dir=bin
+++ cd bin
+++ pwd
++ local full_path_script_dir=/var/lib/boinc-client/slots/1/bin
+++ dirname /var/lib/boinc-client/slots/1/bin
++ local full_path_env=/var/lib/boinc-client/slots/1
+++ basename /var/lib/boinc-client/slots/1
++ local env_name=1
++ '[' -n '' ']'
++ export CONDA_PREFIX=/var/lib/boinc-client/slots/1
++ CONDA_PREFIX=/var/lib/boinc-client/slots/1
++ export _CONDA_PACK_OLD_PS1=
++ _CONDA_PACK_OLD_PS1=
++ PATH=/var/lib/boinc-client/slots/1/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin:.
++ PS1='(1) '
++ case "$_CONDA_SHELL_FLAVOR" in
++ hash -r
++ local _script_dir=/var/lib/boinc-client/slots/1/etc/conda/activate.d
++ '[' -d /var/lib/boinc-client/slots/1/etc/conda/activate.d ']'
+ export PATH=/var/lib/boinc-client/slots/1:/var/lib/boinc-client/slots/1/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin:.
+ PATH=/var/lib/boinc-client/slots/1:/var/lib/boinc-client/slots/1/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin:.
+ echo 'Create a temporary directory'
+ export TMP=/var/lib/boinc-client/slots/1/tmp
+ TMP=/var/lib/boinc-client/slots/1/tmp
+ mkdir -p /var/lib/boinc-client/slots/1/tmp
+ echo 'Configure AToM'
+ echo localhost,0:0,1,CUDA,,/var/lib/boinc-client/slots/1/tmp
+ FILE=starting_sample
+ '[' -f starting_sample ']'
+ echo 'starting_sample does not exist.'
+ echo 'Install ATM and deps'
+ python -m pip list
+ python -m pip install pyaml -v
WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7ca971237b10>: Failed to establish a new connection: [Errno 101] Network is unreachable')': /simple/pyaml/
WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7ca971239390>: Failed to establish a new connection: [Errno 101] Network is unreachable')': /simple/pyaml/
WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7ca97123a0d0>: Failed to establish a new connection: [Errno 101] Network is unreachable')': /simple/pyaml/
WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7ca97123b090>: Failed to establish a new connection: [Errno 101] Network is unreachable')': /simple/pyaml/
WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7ca97123bd50>: Failed to establish a new connection: [Errno 101] Network is unreachable')': /simple/pyaml/
ERROR: Could not find a version that satisfies the requirement pyaml (from versions: none)
ERROR: No matching distribution found for pyaml
2025-12-14 08:37:48 (15829): bin/bash exited; CPU time 0.399905
2025-12-14 08:37:48 (15829): app exit status: 0x1
2025-12-14 08:37:48 (15829): called boinc_finish(195)

</stderr_txt>
]]>


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