Task 38582667

Name HIF2A_A08_A36_r0_1-QUICO_ATM_GAFF2_LOMAP_HIF2A-4-5-RND0237_0
Workunit 31546944
Created 13 Dec 2025, 9:20:38 UTC
Sent 13 Dec 2025, 9:20:51 UTC
Report deadline 18 Dec 2025, 9:20:51 UTC
Received 13 Dec 2025, 17:53:28 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 632144
Run time 2 hours 0 min 46 sec
CPU time 1 hours 59 min 5 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 29,155.78 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 474.89 MB
Peak swap size 6.54 GB
Peak disk usage 2.96 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
07:52:31 (61012): wrapper (7.9.26016): starting
07:52:31 (61012): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A08_A36_0.pdb
QB_A08_A36_0.xml
QB_A08_A36_equil.pdb
QB_A08_A36.inpcrd
QB_A08_A36_input.yaml
QB_A08_A36_mdlambda.pdb
QB_A08_A36_min.pdb
QB_A08_A36_npt.pdb
QB_A08_A36.pdb
QB_A08_A36.prmtop
QB_A08_A36_sys.xml
QB_A08_A36_therm.pdb
run.bat
run.sh
07:52:32 (61012): Library/usr/bin/tar.exe exited; CPU time 0.015625
07:52:32 (61012): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
09:52:43 (61012): C:/Windows/system32/cmd.exe exited; CPU time 7145.890625
09:52:43 (61012): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 192583307 bytes.
Dumping objects ->
{3835621} normal block at 0x000001538B9D9200, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835610} normal block at 0x0000015389C55890, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835599} normal block at 0x0000015389C55820, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835588} normal block at 0x0000015389C55270, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835577} normal block at 0x0000015389C55740, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835546} normal block at 0x000001538B9892C0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835535} normal block at 0x000001538B99F240, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835532} normal block at 0x0000015389C4DFD0, 8 bytes long.
 Data: <   &#138;S   > 00 00 08 8A 53 01 00 00 
{3834725} normal block at 0x000001538B99F7C0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833967} normal block at 0x0000015389C4D760, 8 bytes long.
 Data: < Z&#161;&#139;S   > 80 5A A1 8B 53 01 00 00 
..\zip\boinc_zip.cpp(122) : {315} normal block at 0x0000015389C42790, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x0000015389C3ED10, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{299} normal block at 0x0000015389C56290, 16 bytes long.
 Data: <hq&#197;&#137;S           > 68 71 C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000015389C56A10, 16 bytes long.
 Data: <@q&#197;&#137;S           > 40 71 C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000015389C4FD90, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{296} normal block at 0x0000015389C566F0, 16 bytes long.
 Data: < q&#197;&#137;S           > 18 71 C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000015389C55FC0, 16 bytes long.
 Data: <&#240;p&#197;&#137;S           > F0 70 C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000015389C55F70, 16 bytes long.
 Data: <&#200;p&#197;&#137;S           > C8 70 C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000015389C55F20, 16 bytes long.
 Data: <&#160;p&#197;&#137;S           > A0 70 C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000015389C55580, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{291} normal block at 0x0000015389C561A0, 16 bytes long.
 Data: <&#232;+&#196;&#137;S           > E8 2B C4 89 53 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000015389C501B0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{289} normal block at 0x0000015389C55ED0, 16 bytes long.
 Data: <&#192;+&#196;&#137;S           > C0 2B C4 89 53 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000015389C564C0, 16 bytes long.
 Data: < +&#196;&#137;S           > 98 2B C4 89 53 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000015389C56510, 16 bytes long.
 Data: <p+&#196;&#137;S           > 70 2B C4 89 53 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000015389C56240, 16 bytes long.
 Data: <H+&#196;&#137;S           > 48 2B C4 89 53 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000015389C56C90, 16 bytes long.
 Data: < +&#196;&#137;S           > 20 2B C4 89 53 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000015389C56BF0, 16 bytes long.
 Data: <&#248;*&#196;&#137;S           > F8 2A C4 89 53 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000015389C500F0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{281} normal block at 0x0000015389C55E80, 16 bytes long.
 Data: <&#208;*&#196;&#137;S           > D0 2A C4 89 53 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000015389C42AD0, 320 bytes long.
 Data: < ^&#197;&#137;S   &#240; &#197;&#137;S   > 80 5E C5 89 53 01 00 00 F0 00 C5 89 53 01 00 00 
{279} normal block at 0x0000015389C569C0, 16 bytes long.
 Data: < p&#197;&#137;S           > 80 70 C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000015389C56970, 16 bytes long.
 Data: <Xp&#197;&#137;S           > 58 70 C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000015389C4FB50, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{276} normal block at 0x0000015389C566A0, 16 bytes long.
 Data: <0p&#197;&#137;S           > 30 70 C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000015389C4FE50, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{274} normal block at 0x0000015389C56150, 16 bytes long.
 Data: <xo&#197;&#137;S           > 78 6F C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000015389C56380, 16 bytes long.
 Data: <Po&#197;&#137;S           > 50 6F C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000015389C56830, 16 bytes long.
 Data: <(o&#197;&#137;S           > 28 6F C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000015389C56C40, 16 bytes long.
 Data: < o&#197;&#137;S           > 00 6F C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000015389C562E0, 16 bytes long.
 Data: <&#216;n&#197;&#137;S           > D8 6E C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000015389C56100, 16 bytes long.
 Data: <&#176;n&#197;&#137;S           > B0 6E C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000015389C568D0, 16 bytes long.
 Data: <&#240;U&#197;&#137;S           > F0 55 C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000015389C555F0, 40 bytes long.
 Data: <&#208;h&#197;&#137;S   &#192;&#146; &#139;S   > D0 68 C5 89 53 01 00 00 C0 92 98 8B 53 01 00 00 
{265} normal block at 0x0000015389C561F0, 16 bytes long.
 Data: < n&#197;&#137;S           > 90 6E C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000015389C56B00, 16 bytes long.
 Data: <hn&#197;&#137;S           > 68 6E C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000015389C4FC70, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{262} normal block at 0x0000015389C56600, 16 bytes long.
 Data: <@n&#197;&#137;S           > 40 6E C5 89 53 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000015389C56E40, 992 bytes long.
 Data: < f&#197;&#137;S   p&#252;&#196;&#137;S   > 00 66 C5 89 53 01 00 00 70 FC C4 89 53 01 00 00 
{97} normal block at 0x0000015389C4FC10, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{96} normal block at 0x0000015389C4DD50, 16 bytes long.
 Data: <P&#217;&#195;&#137;S           > 50 D9 C3 89 53 01 00 00 00 00 00 00 00 00 00 00 
{95} normal block at 0x0000015389C3D950, 40 bytes long.
 Data: <P&#221;&#196;&#137;S    &#252;&#196;&#137;S   > 50 DD C4 89 53 01 00 00 10 FC C4 89 53 01 00 00 
{74} normal block at 0x0000015389C4D710, 16 bytes long.
 Data: < &#234; F&#246;           > 80 EA 15 46 F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000015389C4E110, 16 bytes long.
 Data: <@&#233; F&#246;           > 40 E9 15 46 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000015389C4DF80, 16 bytes long.
 Data: <&#248;W F&#246;           > F8 57 12 46 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000015389C4E520, 16 bytes long.
 Data: <&#216;W F&#246;           > D8 57 12 46 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000015389C4E390, 16 bytes long.
 Data: <P  F&#246;           > 50 04 12 46 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000015389C4DE90, 16 bytes long.
 Data: <0  F&#246;           > 30 04 12 46 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000015389C4DB70, 16 bytes long.
 Data: <&#224;  F&#246;           > E0 02 12 46 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000015389C4E430, 16 bytes long.
 Data: <   F&#246;           > 10 04 12 46 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000015389C4DDA0, 16 bytes long.
 Data: <p  F&#246;           > 70 04 12 46 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000015389C4D990, 16 bytes long.
 Data: < &#192; F&#246;           > 18 C0 10 46 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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