Task 38582464

Name HIF2A_A31_A23_r0_1-QUICO_ATM_GAFF2_LOMAP_HIF2A-2-5-RND6836_0
Workunit 31546774
Created 13 Dec 2025, 5:22:08 UTC
Sent 13 Dec 2025, 5:22:20 UTC
Report deadline 18 Dec 2025, 5:22:20 UTC
Received 13 Dec 2025, 7:32:46 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 642860
Run time 2 hours 10 min 15 sec
CPU time 2 hours 10 min 15 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 83,075.51 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 492.84 MB
Peak swap size 12.80 GB
Peak disk usage 2.97 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
06:23:32 (22920): wrapper (7.9.26016): starting
06:23:32 (22920): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A31_A23_0.pdb
QB_A31_A23_0.xml
QB_A31_A23_equil.pdb
QB_A31_A23.inpcrd
QB_A31_A23_input.yaml
QB_A31_A23_mdlambda.pdb
QB_A31_A23_min.pdb
QB_A31_A23_npt.pdb
QB_A31_A23.pdb
QB_A31_A23.prmtop
QB_A31_A23_sys.xml
QB_A31_A23_therm.pdb
run.bat
run.sh
06:23:33 (22920): Library/usr/bin/tar.exe exited; CPU time 0.000000
06:23:33 (22920): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
08:30:45 (22920): C:/Windows/system32/cmd.exe exited; CPU time 7815.625000
08:30:45 (22920): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 169063535 bytes.
Dumping objects ->
{3835363} normal block at 0x00000190599391E0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835352} normal block at 0x00000190599395D0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835341} normal block at 0x0000019059938BC0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835330} normal block at 0x0000019059938E60, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835319} normal block at 0x0000019059938ED0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835288} normal block at 0x000001905B68A020, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835275} normal block at 0x000001905990DC00, 8 bytes long.
 Data: <  &#135;Y    > 00 00 87 59 90 01 00 00 
{3833963} normal block at 0x000001905990D070, 8 bytes long.
 Data: < 3n[    > 10 33 6E 5B 90 01 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x0000019059901010, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000019059902470, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x0000019059915640, 16 bytes long.
 Data: <&#168;h&#145;Y            > A8 68 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000019059916040, 16 bytes long.
 Data: < h&#145;Y            > 80 68 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000019059911AA0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x00000190599154B0, 16 bytes long.
 Data: <Xh&#145;Y            > 58 68 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000190599157D0, 16 bytes long.
 Data: <0h&#145;Y            > 30 68 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000019059915870, 16 bytes long.
 Data: < h&#145;Y            > 08 68 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000190599161D0, 16 bytes long.
 Data: <&#224;g&#145;Y            > E0 67 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000190599105E0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x0000019059916270, 16 bytes long.
 Data: <X  Y            > 58 07 90 59 90 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000190599110E0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x0000019059915820, 16 bytes long.
 Data: <0  Y            > 30 07 90 59 90 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000019059915B40, 16 bytes long.
 Data: <   Y            > 08 07 90 59 90 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000019059915D20, 16 bytes long.
 Data: <&#224;  Y            > E0 06 90 59 90 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000019059915780, 16 bytes long.
 Data: <&#184;  Y            > B8 06 90 59 90 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000019059915460, 16 bytes long.
 Data: <   Y            > 90 06 90 59 90 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000019059915FF0, 16 bytes long.
 Data: <h  Y            > 68 06 90 59 90 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000019059911A40, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x0000019059915910, 16 bytes long.
 Data: <@  Y            > 40 06 90 59 90 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000019059900640, 320 bytes long.
 Data: < Y&#145;Y    @ &#145;Y    > 10 59 91 59 90 01 00 00 40 1A 91 59 90 01 00 00 
{277} normal block at 0x0000019059915AF0, 16 bytes long.
 Data: <&#192;g&#145;Y            > C0 67 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000019059915CD0, 16 bytes long.
 Data: < g&#145;Y            > 98 67 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000190599113E0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x0000019059915FA0, 16 bytes long.
 Data: <pg&#145;Y            > 70 67 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000190599112C0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x0000019059915730, 16 bytes long.
 Data: <&#184;f&#145;Y            > B8 66 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000190599159B0, 16 bytes long.
 Data: < f&#145;Y            > 90 66 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000190599156E0, 16 bytes long.
 Data: <hf&#145;Y            > 68 66 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000190599160E0, 16 bytes long.
 Data: <@f&#145;Y            > 40 66 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000019059916180, 16 bytes long.
 Data: < f&#145;Y            > 18 66 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000019059915F00, 16 bytes long.
 Data: <&#240;e&#145;Y            > F0 65 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000019059915C80, 16 bytes long.
 Data: <@ &#145;Y            > 40 03 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000019059910340, 40 bytes long.
 Data: < \&#145;Y     &#160;h[    > 80 5C 91 59 90 01 00 00 20 A0 68 5B 90 01 00 00 
{263} normal block at 0x0000019059915410, 16 bytes long.
 Data: <&#208;e&#145;Y            > D0 65 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000019059915EB0, 16 bytes long.
 Data: <&#168;e&#145;Y            > A8 65 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000019059911860, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x00000190599162C0, 16 bytes long.
 Data: < e&#145;Y            > 80 65 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000019059916580, 992 bytes long.
 Data: <&#192;b&#145;Y    ` &#145;Y    > C0 62 91 59 90 01 00 00 60 18 91 59 90 01 00 00 
{95} normal block at 0x0000019059911380, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x000001905990D430, 16 bytes long.
 Data: <p &#145;Y            > 70 05 91 59 90 01 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x0000019059910570, 40 bytes long.
 Data: <0&#212; Y      &#145;Y    > 30 D4 90 59 90 01 00 00 80 13 91 59 90 01 00 00 
{72} normal block at 0x000001905990D1B0, 16 bytes long.
 Data: < &#234;J &#246;           > 80 EA 4A B2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001905990DB10, 16 bytes long.
 Data: <@&#233;J &#246;           > 40 E9 4A B2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001905990D200, 16 bytes long.
 Data: <&#248;WG &#246;           > F8 57 47 B2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001905990DA70, 16 bytes long.
 Data: <&#216;WG &#246;           > D8 57 47 B2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001905990DCF0, 16 bytes long.
 Data: <P G &#246;           > 50 04 47 B2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001905990D340, 16 bytes long.
 Data: <0 G &#246;           > 30 04 47 B2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001905990D610, 16 bytes long.
 Data: <&#224; G &#246;           > E0 02 47 B2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001905990DED0, 16 bytes long.
 Data: <  G &#246;           > 10 04 47 B2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001905990DCA0, 16 bytes long.
 Data: <p G &#246;           > 70 04 47 B2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001905990DC50, 16 bytes long.
 Data: < &#192;E &#246;           > 18 C0 45 B2 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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