Task 38582141

Name JNK1_A38_A37_r2_1-QUICO_ATM_GAFF2_LOMAP_JNK1_2-0-5-RND8877_4
Workunit 31545258
Created 12 Dec 2025, 21:57:41 UTC
Sent 12 Dec 2025, 21:57:44 UTC
Report deadline 17 Dec 2025, 21:57:44 UTC
Received 15 Dec 2025, 23:17:41 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 197 (0x000000C5) EXIT_TIME_LIMIT_EXCEEDED
Computer ID 610109
Run time 2 days 15 hours 8 min 26 sec
CPU time 2 days 5 hours 56 min 25 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 5,308.78 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 717.18 MB
Peak swap size 18.78 GB
Peak disk usage 3.32 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<message>
exceeded elapsed time limit 227305.41 (100000000000.00G/439936.74G)</message>
<stderr_txt>
02:41:17 (26816): wrapper (7.9.26016): starting
02:41:17 (26816): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A38_A37_0.pdb
QB_A38_A37_0.xml
QB_A38_A37_equil.pdb
QB_A38_A37.inpcrd
QB_A38_A37_input.yaml
QB_A38_A37_mdlambda.pdb
QB_A38_A37_min.pdb
QB_A38_A37_npt.pdb
QB_A38_A37_out_merged_nowater.pdb
QB_A38_A37.pdb
QB_A38_A37.prmtop
QB_A38_A37_sys.xml
QB_A38_A37_therm.pdb
run.bat
run.sh
02:41:21 (26816): Library/usr/bin/tar.exe exited; CPU time 0.015625
02:41:21 (26816): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835271} normal block at 0x000000000052DCA0, 8 bytes long.
 Data: <        > 00 00 8E 00 00 00 00 00 
..\lib\diagnostics_win.cpp(417) : {3833956} normal block at 0x00000000027C4C80, 1080 bytes long.
 Data: <p7      T       > 70 37 00 00 CD CD CD CD 54 02 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x00000000005217E0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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