Task 38581680

Name HIF2A_A01_A39_r0_4-QUICO_ATM_GAFF2_LOMAP_HIF2A-1-5-RND4458_0
Workunit 31546133
Created 12 Dec 2025, 12:51:21 UTC
Sent 12 Dec 2025, 12:51:28 UTC
Report deadline 17 Dec 2025, 12:51:28 UTC
Received 12 Dec 2025, 16:38:59 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 638103
Run time 2 hours 55 min 15 sec
CPU time 2 hours 55 min 5 sec
Validate state Valid
Credit 750,000.00
Device peak FLOPS 22,246.11 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 475.41 MB
Peak swap size 6.61 GB
Peak disk usage 2.96 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
13:52:36 (3892): wrapper (7.9.26016): starting
13:52:36 (3892): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A01_A39_0.pdb
QB_A01_A39_0.xml
QB_A01_A39_equil.pdb
QB_A01_A39.inpcrd
QB_A01_A39_input.yaml
QB_A01_A39_mdlambda.pdb
QB_A01_A39_min.pdb
QB_A01_A39_npt.pdb
QB_A01_A39.pdb
QB_A01_A39.prmtop
QB_A01_A39_sys.xml
QB_A01_A39_therm.pdb
run.bat
run.sh
13:52:37 (3892): Library/usr/bin/tar.exe exited; CPU time 0.000000
13:52:37 (3892): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
16:44:25 (16076): wrapper (7.9.26016): starting
16:44:25 (16076): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
Ein Unterverzeichnis oder eine Datei mit dem Namen "C:\ProgramData\BOINC\slots\0\tmp" existiert bereits.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
17:38:21 (16076): C:/Windows/system32/cmd.exe exited; CPU time 3267.218750
17:38:21 (16076): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 44051584 bytes.
Dumping objects ->
{1582} normal block at 0x00000147DB344D50, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1571} normal block at 0x00000147DB344880, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1560} normal block at 0x00000147DB344A40, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{1549} normal block at 0x00000147DB344810, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1538} normal block at 0x00000147DB344C70, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{1507} normal block at 0x00000147DB331330, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1496} normal block at 0x00000147DB32DFD0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {1493} normal block at 0x00000147DB3461F0, 8 bytes long.
 Data: <  v G   > 00 00 76 DB 47 01 00 00 
{889} normal block at 0x00000147DB331280, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{305} normal block at 0x00000147DB346420, 8 bytes long.
 Data: <Pi4 G   > 50 69 34 DB 47 01 00 00 
{296} normal block at 0x00000147DB330B40, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x00000147DB345890, 16 bytes long.
 Data: <Xh4 G           > 58 68 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000147DB345BB0, 16 bytes long.
 Data: <0h4 G           > 30 68 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000147DB33FBF0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x00000147DB345AC0, 16 bytes long.
 Data: < h4 G           > 08 68 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000147DB3464C0, 16 bytes long.
 Data: < g4 G           > E0 67 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000147DB346470, 16 bytes long.
 Data: < g4 G           > B8 67 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000147DB345DE0, 16 bytes long.
 Data: < g4 G           > 90 67 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000147DB344C00, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x00000147DB3455C0, 16 bytes long.
 Data: <  3 G           > 08 16 33 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000147DB33FB90, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x00000147DB346380, 16 bytes long.
 Data: <  3 G           > E0 15 33 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000147DB345700, 16 bytes long.
 Data: <  3 G           > B8 15 33 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000147DB3462E0, 16 bytes long.
 Data: <  3 G           > 90 15 33 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000147DB3461A0, 16 bytes long.
 Data: <h 3 G           > 68 15 33 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000147DB346150, 16 bytes long.
 Data: <@ 3 G           > 40 15 33 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000147DB345ED0, 16 bytes long.
 Data: <  3 G           > 18 15 33 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000147DB33F470, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x00000147DB345D90, 16 bytes long.
 Data: <  3 G           > F0 14 33 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000147DB3314F0, 320 bytes long.
 Data: < ]4 G   p 3 G   > 90 5D 34 DB 47 01 00 00 70 F4 33 DB 47 01 00 00 
{275} normal block at 0x00000147DB346330, 16 bytes long.
 Data: <pg4 G           > 70 67 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000147DB346290, 16 bytes long.
 Data: <Hg4 G           > 48 67 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000147DB33FD10, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x00000147DB346100, 16 bytes long.
 Data: < g4 G           > 20 67 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000147DB33FAD0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x00000147DB3456B0, 16 bytes long.
 Data: <hf4 G           > 68 66 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000147DB346010, 16 bytes long.
 Data: <@f4 G           > 40 66 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000147DB3460B0, 16 bytes long.
 Data: < f4 G           > 18 66 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000147DB3459D0, 16 bytes long.
 Data: < e4 G           > F0 65 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000147DB345CF0, 16 bytes long.
 Data: < e4 G           > C8 65 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000147DB345A20, 16 bytes long.
 Data: < e4 G           > A0 65 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000147DB345C50, 16 bytes long.
 Data: < J4 G           > B0 4A 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000147DB344AB0, 40 bytes long.
 Data: <P\4 G   0 3 G   > 50 5C 34 DB 47 01 00 00 30 13 33 DB 47 01 00 00 
{261} normal block at 0x00000147DB345F70, 16 bytes long.
 Data: < e4 G           > 80 65 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000147DB3463D0, 16 bytes long.
 Data: <Xe4 G           > 58 65 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000147DB33FA70, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x00000147DB345FC0, 16 bytes long.
 Data: <0e4 G           > 30 65 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000147DB346530, 992 bytes long.
 Data: < _4 G   p 3 G   > C0 5F 34 DB 47 01 00 00 70 FA 33 DB 47 01 00 00 
{93} normal block at 0x00000147DB33FF50, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x00000147DB33D650, 16 bytes long.
 Data: <`I4 G           > 60 49 34 DB 47 01 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x00000147DB344960, 40 bytes long.
 Data: <P 3 G   P 3 G   > 50 D6 33 DB 47 01 00 00 50 FF 33 DB 47 01 00 00 
{70} normal block at 0x00000147DB33DA10, 16 bytes long.
 Data: <  j             > 80 EA 6A 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000147DB33DD80, 16 bytes long.
 Data: <@ j             > 40 E9 6A 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000147DB33D6F0, 16 bytes long.
 Data: < Wg             > F8 57 67 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000147DB33DC90, 16 bytes long.
 Data: < Wg             > D8 57 67 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000147DB33D740, 16 bytes long.
 Data: <P g             > 50 04 67 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000147DB33DBA0, 16 bytes long.
 Data: <0 g             > 30 04 67 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000147DB33D0B0, 16 bytes long.
 Data: <  g             > E0 02 67 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000147DB33DB50, 16 bytes long.
 Data: <  g             > 10 04 67 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000147DB33DEC0, 16 bytes long.
 Data: <p g             > 70 04 67 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000147DB33D560, 16 bytes long.
 Data: <  e             > 18 C0 65 8F F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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