Task 38580958

Name JNK1_A31_A38_r0_1-QUICO_ATM_GAFF2_LOMAP_JNK1_2-0-5-RND6442_2
Workunit 31545246
Created 12 Dec 2025, 8:32:13 UTC
Sent 12 Dec 2025, 8:32:19 UTC
Report deadline 17 Dec 2025, 8:32:19 UTC
Received 12 Dec 2025, 22:30:39 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 638780
Run time 6 hours 34 min 1 sec
CPU time 6 hours 24 min 52 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 15,121.44 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 717.75 MB
Peak swap size 11.37 GB
Peak disk usage 3.06 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
23:56:03 (76476): wrapper (7.9.26016): starting
23:56:03 (76476): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A31_A38_0.pdb
QB_A31_A38_0.xml
QB_A31_A38_equil.pdb
QB_A31_A38.inpcrd
QB_A31_A38_input.yaml
QB_A31_A38_mdlambda.pdb
QB_A31_A38_min.pdb
QB_A31_A38_npt.pdb
QB_A31_A38_out_merged_nowater.pdb
QB_A31_A38.pdb
QB_A31_A38.prmtop
QB_A31_A38_sys.xml
QB_A31_A38_therm.pdb
run.bat
run.sh
23:56:05 (76476): Library/usr/bin/tar.exe exited; CPU time 0.015625
23:56:05 (76476): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835231} normal block at 0x000001FFA14EDB50, 8 bytes long.
 Data: <        > 00 00 E6 A2 FF 01 00 00 
..\lib\diagnostics_win.cpp(417) : {3833954} normal block at 0x000001FFA31F4BF0, 1080 bytes long.
 Data: <                > D0 92 00 00 CD CD CD CD E0 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {309} normal block at 0x000001FFA14E12C0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2025 Universitat Pompeu Fabra