Task 38580874

Name JNK1_A19_A34_r0_1-QUICO_ATM_GAFF2_LOMAP_JNK1_3-1-5-RND0263_1
Workunit 31545456
Created 12 Dec 2025, 3:24:47 UTC
Sent 12 Dec 2025, 3:24:51 UTC
Report deadline 17 Dec 2025, 3:24:51 UTC
Received 12 Dec 2025, 19:55:33 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID 546853
Run time 16 hours 27 min 12 sec
CPU time 16 hours 23 min 31 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 4,574.08 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 704.85 MB
Peak swap size 12.77 GB
Peak disk usage 3.59 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<message>
The operating system cannot run (null).
 (0xc3) - exit code 195 (0xc3)</message>
<stderr_txt>
06:28:12 (20512): wrapper (7.9.26016): starting
06:28:12 (20512): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A19_A34_0.pdb
QB_A19_A34_0.xml
QB_A19_A34_equil.pdb
QB_A19_A34.inpcrd
QB_A19_A34_input.yaml
QB_A19_A34_mdlambda.pdb
QB_A19_A34_min.pdb
QB_A19_A34_npt.pdb
QB_A19_A34_out_merged_nowater.pdb
QB_A19_A34.pdb
QB_A19_A34.prmtop
QB_A19_A34_sys.xml
QB_A19_A34_therm.pdb
run.bat
run.sh
06:28:17 (20512): Library/usr/bin/tar.exe exited; CPU time 0.031250
06:28:17 (20512): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
'doskey' is not recognized as an internal or external command,
operable program or batch file.
'doskey' is not recognized as an internal or external command,
operable program or batch file.
  WARNING: The script pyaml.exe is installed in 'X:\BOINC\slots\27\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'X:\BOINC\slots\27\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:53:23 (20512): C:/Windows/system32/cmd.exe exited; CPU time 59011.937500
22:53:23 (20512): app exit status: 0x1
22:53:23 (20512): called boinc_finish(195)
0 bytes in 0 Free Blocks.
380 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 1167350879 bytes.
Dumping objects ->
{3835272} normal block at 0x0000025D74D7C600, 48 bytes long.
 Data: <PATH=X:\BOINC\sl> 50 41 54 48 3D 58 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835261} normal block at 0x0000025D76A6B330, 32 bytes long.
 Data: <HOME=X:\BOINC\sl> 48 4F 4D 45 3D 58 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835250} normal block at 0x0000025D76A6AC70, 32 bytes long.
 Data: <TMP=X:\BOINC\slo> 54 4D 50 3D 58 3A 5C 42 4F 49 4E 43 5C 73 6C 6F 
{3835239} normal block at 0x0000025D76A6BB10, 32 bytes long.
 Data: <TEMP=X:\BOINC\sl> 54 45 4D 50 3D 58 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835228} normal block at 0x0000025D76A6B090, 32 bytes long.
 Data: <TMPDIR=X:\BOINC\> 54 4D 50 44 49 52 3D 58 3A 5C 42 4F 49 4E 43 5C 
{3835197} normal block at 0x0000025D74D7BC60, 48 bytes long.
 Data: <PATH=X:\BOINC\sl> 50 41 54 48 3D 58 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835186} normal block at 0x0000025D76A33F10, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835183} normal block at 0x0000025D74D767F0, 8 bytes long.
 Data: <  &#202;t]   > 00 00 CA 74 5D 02 00 00 
{3834579} normal block at 0x0000025D76A34750, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833999} normal block at 0x0000025D74D76C50, 8 bytes long.
 Data: <&#224; &#218;t]   > E0 0B DA 74 5D 02 00 00 
..\zip\boinc_zip.cpp(122) : {331} normal block at 0x0000025D74D5D3B0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{316} normal block at 0x0000025D74D5B230, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{315} normal block at 0x0000025D74D7D890, 16 bytes long.
 Data: <&#200; &#215;t]           > C8 B9 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{314} normal block at 0x0000025D74D7D7F0, 16 bytes long.
 Data: <&#160; &#215;t]           > A0 B9 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{313} normal block at 0x0000025D74D7B0A0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{312} normal block at 0x0000025D74D7D6B0, 16 bytes long.
 Data: <x &#215;t]           > 78 B9 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{311} normal block at 0x0000025D74D7D660, 16 bytes long.
 Data: <P &#215;t]           > 50 B9 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{310} normal block at 0x0000025D74D7D980, 16 bytes long.
 Data: <( &#215;t]           > 28 B9 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{309} normal block at 0x0000025D74D7CE90, 16 bytes long.
 Data: <  &#215;t]           > 00 B9 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{308} normal block at 0x0000025D74D7BDB0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{307} normal block at 0x0000025D74D7CB70, 16 bytes long.
 Data: <&#216;&#196;&#213;t]           > D8 C4 D5 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{306} normal block at 0x0000025D74D7AA40, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{305} normal block at 0x0000025D74D7D1B0, 16 bytes long.
 Data: <&#176;&#196;&#213;t]           > B0 C4 D5 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{303} normal block at 0x0000025D74D7D110, 16 bytes long.
 Data: < &#196;&#213;t]           > 88 C4 D5 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x0000025D74D7D930, 16 bytes long.
 Data: <`&#196;&#213;t]           > 60 C4 D5 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x0000025D74D7DA20, 16 bytes long.
 Data: <8&#196;&#213;t]           > 38 C4 D5 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x0000025D74D7D5C0, 16 bytes long.
 Data: < &#196;&#213;t]           > 10 C4 D5 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000025D74D7CBC0, 16 bytes long.
 Data: <&#232;&#195;&#213;t]           > E8 C3 D5 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000025D74D7AE60, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{297} normal block at 0x0000025D74D7DA70, 16 bytes long.
 Data: <&#192;&#195;&#213;t]           > C0 C3 D5 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000025D74D5C3C0, 320 bytes long.
 Data: <p&#218;&#215;t]   `&#174;&#215;t]   > 70 DA D7 74 5D 02 00 00 60 AE D7 74 5D 02 00 00 
{295} normal block at 0x0000025D74D7D8E0, 16 bytes long.
 Data: <&#224;&#184;&#215;t]           > E0 B8 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000025D74D7D610, 16 bytes long.
 Data: <&#184;&#184;&#215;t]           > B8 B8 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000025D74D7A860, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{292} normal block at 0x0000025D74D7D520, 16 bytes long.
 Data: <&#144;&#184;&#215;t]           > 90 B8 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000025D74D7B520, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{290} normal block at 0x0000025D74D7D4D0, 16 bytes long.
 Data: <&#216;&#183;&#215;t]           > D8 B7 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000025D74D7D0C0, 16 bytes long.
 Data: <&#176;&#183;&#215;t]           > B0 B7 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000025D74D7D070, 16 bytes long.
 Data: < &#183;&#215;t]           > 88 B7 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000025D74D7D480, 16 bytes long.
 Data: <`&#183;&#215;t]           > 60 B7 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000025D74D76700, 16 bytes long.
 Data: <8&#183;&#215;t]           > 38 B7 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000025D74D770B0, 16 bytes long.
 Data: < &#183;&#215;t]           > 10 B7 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000025D74D77060, 16 bytes long.
 Data: <P&#192;&#215;t]           > 50 C0 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000025D74D7C050, 40 bytes long.
 Data: <`p&#215;t]   `&#188;&#215;t]   > 60 70 D7 74 5D 02 00 00 60 BC D7 74 5D 02 00 00 
{281} normal block at 0x0000025D74D772E0, 16 bytes long.
 Data: <&#240;&#182;&#215;t]           > F0 B6 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000025D74D77010, 16 bytes long.
 Data: <&#200;&#182;&#215;t]           > C8 B6 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000025D74D7B2E0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{278} normal block at 0x0000025D74D77290, 16 bytes long.
 Data: <&#160;&#182;&#215;t]           > A0 B6 D7 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000025D74D7B6A0, 992 bytes long.
 Data: <&#144;r&#215;t]   &#224;&#178;&#215;t]   > 90 72 D7 74 5D 02 00 00 E0 B2 D7 74 5D 02 00 00 
{113} normal block at 0x0000025D74D6D2C0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{112} normal block at 0x0000025D74D769D0, 16 bytes long.
 Data: <&#144;&#248;&#213;t]           > 90 F8 D5 74 5D 02 00 00 00 00 00 00 00 00 00 00 
{111} normal block at 0x0000025D74D5F890, 40 bytes long.
 Data: <&#208;i&#215;t]   &#192;&#210;&#214;t]   > D0 69 D7 74 5D 02 00 00 C0 D2 D6 74 5D 02 00 00 
{90} normal block at 0x0000025D74D76B10, 16 bytes long.
 Data: <&#128;&#234;&#246;&#180;&#247;           > 80 EA F6 B4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{89} normal block at 0x0000025D74D76E80, 16 bytes long.
 Data: <@&#233;&#246;&#180;&#247;           > 40 E9 F6 B4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{88} normal block at 0x0000025D74D76C00, 16 bytes long.
 Data: <&#248;W&#243;&#180;&#247;           > F8 57 F3 B4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x0000025D74D76AC0, 16 bytes long.
 Data: <&#216;W&#243;&#180;&#247;           > D8 57 F3 B4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{86} normal block at 0x0000025D74D768E0, 16 bytes long.
 Data: <P &#243;&#180;&#247;           > 50 04 F3 B4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{85} normal block at 0x0000025D74D76A70, 16 bytes long.
 Data: <0 &#243;&#180;&#247;           > 30 04 F3 B4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x0000025D74D76B60, 16 bytes long.
 Data: <&#224; &#243;&#180;&#247;           > E0 02 F3 B4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{83} normal block at 0x0000025D74D771A0, 16 bytes long.
 Data: <  &#243;&#180;&#247;           > 10 04 F3 B4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{82} normal block at 0x0000025D74D77150, 16 bytes long.
 Data: <p &#243;&#180;&#247;           > 70 04 F3 B4 F7 7F 00 00 00 00 00 00 00 00 00 00 
{81} normal block at 0x0000025D74D6B370, 16 bytes long.
 Data: < &#192;&#241;&#180;&#247;           > 18 C0 F1 B4 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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