Task 38580661

Name JNK1_A25_A38_r1_1-QUICO_ATM_GAFF2_LOMAP_JNK1_3-0-5-RND3194_1
Workunit 31545352
Created 11 Dec 2025, 16:14:30 UTC
Sent 11 Dec 2025, 16:14:31 UTC
Report deadline 16 Dec 2025, 16:14:31 UTC
Received 12 Dec 2025, 4:51:29 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 631657
Run time 3 hours 26 min
CPU time 3 hours 26 min
Validate state Valid
Credit 750,000.00
Device peak FLOPS 22,070.88 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 691.15 MB
Peak swap size 11.39 GB
Peak disk usage 4.89 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
11:05:33 (45264): wrapper (7.9.26016): starting
11:05:33 (45264): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A25_A38_0.pdb
QB_A25_A38_0.xml
QB_A25_A38_equil.pdb
QB_A25_A38.inpcrd
QB_A25_A38_input.yaml
QB_A25_A38_mdlambda.pdb
QB_A25_A38_min.pdb
QB_A25_A38_npt.pdb
QB_A25_A38_out_merged_nowater.pdb
QB_A25_A38.pdb
QB_A25_A38.prmtop
QB_A25_A38_sys.xml
QB_A25_A38_therm.pdb
run.bat
run.sh
11:05:53 (45264): Library/usr/bin/tar.exe exited; CPU time 0.140625
11:05:53 (45264): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\26\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  Running command pip subprocess to install build dependencies
  Using pip 24.3.1 from C:\ProgramData\BOINC\slots\26\Lib\site-packages\pip (python 3.11)
  Collecting setuptools
    Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/a3/dc/17031897dae0efacfea57dfd3a82fdd2a2aeb58e0ff71b77b87e44edc772/setuptools-80.9.0-py3-none-any.whl.metadata
    Downloading setuptools-80.9.0-py3-none-any.whl.metadata (6.6 kB)
  Collecting setuptools-scm>=8
    Obtaining dependency information for setuptools-scm>=8 from https://files.pythonhosted.org/packages/3d/ea/ac2bf868899d0d2e82ef72d350d97a846110c709bacf2d968431576ca915/setuptools_scm-9.2.2-py3-none-any.whl.metadata
    Downloading setuptools_scm-9.2.2-py3-none-any.whl.metadata (7.7 kB)
  Collecting packaging>=20 (from setuptools-scm>=8)
    Obtaining dependency information for packaging>=20 from https://files.pythonhosted.org/packages/20/12/38679034af332785aac8774540895e234f4d07f7545804097de4b666afd8/packaging-25.0-py3-none-any.whl.metadata
    Downloading packaging-25.0-py3-none-any.whl.metadata (3.3 kB)
  Downloading setuptools-80.9.0-py3-none-any.whl (1.2 MB)
     ---------------------------------------- 1.2/1.2 MB 8.6 MB/s eta 0:00:00
  Downloading setuptools_scm-9.2.2-py3-none-any.whl (62 kB)
  Downloading packaging-25.0-py3-none-any.whl (66 kB)
  Installing collected packages: setuptools, packaging, setuptools-scm
    Creating C:\ProgramData\BOINC\slots\26\pip-build-env-xckqwxvw\overlay\Scripts
  Successfully installed packaging-25.0 setuptools-80.9.0 setuptools-scm-9.2.2
  Running command Getting requirements to build wheel
  C:\ProgramData\BOINC\slots\26\pip-build-env-xckqwxvw\overlay\Lib\site-packages\setuptools_scm\_integration\version_inference.py:51: UserWarning: version of None already set
    warnings.warn(self.message)
  running egg_info
  writing atom_openmm.egg-info\PKG-INFO
  writing dependency_links to atom_openmm.egg-info\dependency_links.txt
  writing entry points to atom_openmm.egg-info\entry_points.txt
  writing requirements to atom_openmm.egg-info\requires.txt
  writing top-level names to atom_openmm.egg-info\top_level.txt
  listing git files failed - pretending there aren't any
  reading manifest file 'atom_openmm.egg-info\SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  adding license file 'LICENSE'
  writing manifest file 'atom_openmm.egg-info\SOURCES.txt'
  Running command Preparing metadata (pyproject.toml)
  C:\ProgramData\BOINC\slots\26\pip-build-env-xckqwxvw\overlay\Lib\site-packages\setuptools_scm\_integration\version_inference.py:51: UserWarning: version of None already set
    warnings.warn(self.message)
  running dist_info
  creating C:\ProgramData\BOINC\slots\26\pip-modern-metadata-i54444u6\atom_openmm.egg-info
  writing C:\ProgramData\BOINC\slots\26\pip-modern-metadata-i54444u6\atom_openmm.egg-info\PKG-INFO
  writing dependency_links to C:\ProgramData\BOINC\slots\26\pip-modern-metadata-i54444u6\atom_openmm.egg-info\dependency_links.txt
  writing entry points to C:\ProgramData\BOINC\slots\26\pip-modern-metadata-i54444u6\atom_openmm.egg-info\entry_points.txt
  writing requirements to C:\ProgramData\BOINC\slots\26\pip-modern-metadata-i54444u6\atom_openmm.egg-info\requires.txt
  writing top-level names to C:\ProgramData\BOINC\slots\26\pip-modern-metadata-i54444u6\atom_openmm.egg-info\top_level.txt
  writing manifest file 'C:\ProgramData\BOINC\slots\26\pip-modern-metadata-i54444u6\atom_openmm.egg-info\SOURCES.txt'
  listing git files failed - pretending there aren't any
  reading manifest file 'C:\ProgramData\BOINC\slots\26\pip-modern-metadata-i54444u6\atom_openmm.egg-info\SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  adding license file 'LICENSE'
  writing manifest file 'C:\ProgramData\BOINC\slots\26\pip-modern-metadata-i54444u6\atom_openmm.egg-info\SOURCES.txt'
  creating 'C:\ProgramData\BOINC\slots\26\pip-modern-metadata-i54444u6\atom_openmm-8.4.0.dist-info'
  Running command Building wheel for atom-openmm (pyproject.toml)
  C:\ProgramData\BOINC\slots\26\pip-build-env-xckqwxvw\overlay\Lib\site-packages\setuptools_scm\_integration\version_inference.py:51: UserWarning: version of None already set
    warnings.warn(self.message)
  running bdist_wheel
  running build
  running build_py
  creating build\lib\atom_openmm
  copying atom_openmm\abfe_explicit.py -> build\lib\atom_openmm
  copying atom_openmm\abfe_production.py -> build\lib\atom_openmm
  copying atom_openmm\abfe_structprep.py -> build\lib\atom_openmm
  copying atom_openmm\async_re.py -> build\lib\atom_openmm
  copying atom_openmm\gibbs_sampling.py -> build\lib\atom_openmm
  copying atom_openmm\local_openmm_transport.py -> build\lib\atom_openmm
  copying atom_openmm\make_atm_system_from_amber.py -> build\lib\atom_openmm
  copying atom_openmm\make_atm_system_from_pdb.py -> build\lib\atom_openmm
  copying atom_openmm\make_atm_system_from_rcpt_lig.py -> build\lib\atom_openmm
  copying atom_openmm\ommreplica.py -> build\lib\atom_openmm
  copying atom_openmm\ommsystem.py -> build\lib\atom_openmm
  copying atom_openmm\ommworker.py -> build\lib\atom_openmm
  copying atom_openmm\openmm_async_re.py -> build\lib\atom_openmm
  copying atom_openmm\rbfe_explicit.py -> build\lib\atom_openmm
  copying atom_openmm\rbfe_production.py -> build\lib\atom_openmm
  copying atom_openmm\rbfe_structprep.py -> build\lib\atom_openmm
  copying atom_openmm\temperatureRE_explicit.py -> build\lib\atom_openmm
  copying atom_openmm\transport.py -> build\lib\atom_openmm
  copying atom_openmm\uwham.py -> build\lib\atom_openmm
  copying atom_openmm\__init__.py -> build\lib\atom_openmm
  creating build\lib\atom_openmm\utils
  copying atom_openmm\utils\AtomUtils.py -> build\lib\atom_openmm\utils
  copying atom_openmm\utils\config.py -> build\lib\atom_openmm\utils
  copying atom_openmm\utils\singal_guard.py -> build\lib\atom_openmm\utils
  copying atom_openmm\utils\timer.py -> build\lib\atom_openmm\utils
  copying atom_openmm\utils\__init__.py -> build\lib\atom_openmm\utils
  running egg_info
  writing atom_openmm.egg-info\PKG-INFO
  writing dependency_links to atom_openmm.egg-info\dependency_links.txt
  writing entry points to atom_openmm.egg-info\entry_points.txt
  writing requirements to atom_openmm.egg-info\requires.txt
  writing top-level names to atom_openmm.egg-info\top_level.txt
  listing git files failed - pretending there aren't any
  reading manifest file 'atom_openmm.egg-info\SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  adding license file 'LICENSE'
  writing manifest file 'atom_openmm.egg-info\SOURCES.txt'
  copying atom_openmm\utils\logging.conf -> build\lib\atom_openmm\utils
  installing to build\bdist.win-amd64\wheel
  running install
  running install_lib
  creating build\bdist.win-amd64\wheel
  creating build\bdist.win-amd64\wheel\atom_openmm
  copying build\lib\atom_openmm\abfe_explicit.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\abfe_production.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\abfe_structprep.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\async_re.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\gibbs_sampling.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\local_openmm_transport.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\make_atm_system_from_amber.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\make_atm_system_from_pdb.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\make_atm_system_from_rcpt_lig.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\ommreplica.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\ommsystem.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\ommworker.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\openmm_async_re.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\rbfe_explicit.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\rbfe_production.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\rbfe_structprep.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\temperatureRE_explicit.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\transport.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  creating build\bdist.win-amd64\wheel\atom_openmm\utils
  copying build\lib\atom_openmm\utils\AtomUtils.py -> build\bdist.win-amd64\wheel\.\atom_openmm\utils
  copying build\lib\atom_openmm\utils\config.py -> build\bdist.win-amd64\wheel\.\atom_openmm\utils
  copying build\lib\atom_openmm\utils\logging.conf -> build\bdist.win-amd64\wheel\.\atom_openmm\utils
  copying build\lib\atom_openmm\utils\singal_guard.py -> build\bdist.win-amd64\wheel\.\atom_openmm\utils
  copying build\lib\atom_openmm\utils\timer.py -> build\bdist.win-amd64\wheel\.\atom_openmm\utils
  copying build\lib\atom_openmm\utils\__init__.py -> build\bdist.win-amd64\wheel\.\atom_openmm\utils
  copying build\lib\atom_openmm\uwham.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  copying build\lib\atom_openmm\__init__.py -> build\bdist.win-amd64\wheel\.\atom_openmm
  running install_egg_info
  Copying atom_openmm.egg-info to build\bdist.win-amd64\wheel\.\atom_openmm-8.4.0-py3.11.egg-info
  running install_scripts
  creating build\bdist.win-amd64\wheel\atom_openmm-8.4.0.dist-info\WHEEL
  creating 'C:\ProgramData\BOINC\slots\26\pip-wheel-be9wjkdu\.tmp-bebjrc4v\atom_openmm-8.4.0-py3-none-any.whl' and adding 'build\bdist.win-amd64\wheel' to it
  adding 'atom_openmm/__init__.py'
  adding 'atom_openmm/abfe_explicit.py'
  adding 'atom_openmm/abfe_production.py'
  adding 'atom_openmm/abfe_structprep.py'
  adding 'atom_openmm/async_re.py'
  adding 'atom_openmm/gibbs_sampling.py'
  adding 'atom_openmm/local_openmm_transport.py'
  adding 'atom_openmm/make_atm_system_from_amber.py'
  adding 'atom_openmm/make_atm_system_from_pdb.py'
  adding 'atom_openmm/make_atm_system_from_rcpt_lig.py'
  adding 'atom_openmm/ommreplica.py'
  adding 'atom_openmm/ommsystem.py'
  adding 'atom_openmm/ommworker.py'
  adding 'atom_openmm/openmm_async_re.py'
  adding 'atom_openmm/rbfe_explicit.py'
  adding 'atom_openmm/rbfe_production.py'
  adding 'atom_openmm/rbfe_structprep.py'
  adding 'atom_openmm/temperatureRE_explicit.py'
  adding 'atom_openmm/transport.py'
  adding 'atom_openmm/uwham.py'
  adding 'atom_openmm/utils/AtomUtils.py'
  adding 'atom_openmm/utils/__init__.py'
  adding 'atom_openmm/utils/config.py'
  adding 'atom_openmm/utils/logging.conf'
  adding 'atom_openmm/utils/singal_guard.py'
  adding 'atom_openmm/utils/timer.py'
  adding 'atom_openmm-8.4.0.dist-info/licenses/LICENSE'
  adding 'atom_openmm-8.4.0.dist-info/METADATA'
  adding 'atom_openmm-8.4.0.dist-info/WHEEL'
  adding 'atom_openmm-8.4.0.dist-info/entry_points.txt'
  adding 'atom_openmm-8.4.0.dist-info/top_level.txt'
  adding 'atom_openmm-8.4.0.dist-info/RECORD'
  removing build\bdist.win-amd64\wheel
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\26\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835195} normal block at 0x000001C98F2DE4E0, 8 bytes long.
 Data: <        > 00 00 87 8F C9 01 00 00 
..\lib\diagnostics_win.cpp(417) : {3833958} normal block at 0x000001C98F2CE8F0, 1080 bytes long.
 Data: <t0              > 74 30 00 00 CD CD CD CD 08 02 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x000001C98F2D4FC0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
11:24:05 (33080): wrapper (7.9.26016): starting
11:24:05 (33080): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\26\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3849878} normal block at 0x000002CC2593DCD0, 8 bytes long.
 Data: <   %    > 00 00 8B 25 CC 02 00 00 
..\lib\diagnostics_win.cpp(417) : {3848641} normal block at 0x000002CC275C38A0, 1080 bytes long.
 Data: <0[              > 30 5B 00 00 CD CD CD CD C4 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x000002CC25930D00, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
16:31:17 (13032): wrapper (7.9.26016): starting
16:31:17 (13032): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\26\tmp already exists.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3849878} normal block at 0x0000020D7D76DAF0, 8 bytes long.
 Data: <  p}    > 00 00 70 7D 0D 02 00 00 
..\lib\diagnostics_win.cpp(417) : {3848641} normal block at 0x0000020D7F5938D0, 1080 bytes long.
 Data: <                > 08 0A 00 00 CD CD CD CD 9C 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x0000020D7D761340, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
16:34:34 (34372): wrapper (7.9.26016): starting
16:34:34 (34372): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\26\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3849878} normal block at 0x0000017EB376DDC0, 8 bytes long.
 Data: <    ~   > 00 00 20 B5 7E 01 00 00 
..\lib\diagnostics_win.cpp(417) : {3848641} normal block at 0x0000017EB54B38A0, 1080 bytes long.
 Data: <                > A0 9A 00 00 CD CD CD CD 8C 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x0000017EB3760E40, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
16:47:31 (40180): wrapper (7.9.26016): starting
16:47:31 (40180): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\26\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3849878} normal block at 0x00000224A5E3DFF0, 8 bytes long.
 Data: <    $   > 00 00 DD A5 24 02 00 00 
..\lib\diagnostics_win.cpp(417) : {3848641} normal block at 0x00000224A7B538A0, 1080 bytes long.
 Data: <                > 04 1F 00 00 CD CD CD CD B8 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x00000224A5E31840, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
17:17:37 (39472): wrapper (7.9.26016): starting
17:17:37 (39472): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\26\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3849878} normal block at 0x000001A2B60CDB90, 8 bytes long.
 Data: <        > 00 00 03 B6 A2 01 00 00 
..\lib\diagnostics_win.cpp(417) : {3848641} normal block at 0x000001A2B7E138A0, 1080 bytes long.
 Data: <p#              > 70 23 00 00 CD CD CD CD EC 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x000001A2B60C10C0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
18:37:56 (41732): wrapper (7.9.26016): starting
18:37:56 (41732): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\26\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3849878} normal block at 0x000001D2C1F2D820, 8 bytes long.
 Data: <  ?     > 00 00 3F C2 D2 01 00 00 
..\lib\diagnostics_win.cpp(417) : {3848641} normal block at 0x000001D2C3E43F90, 1080 bytes long.
 Data: <|               > 7C 7F 00 00 CD CD CD CD 00 02 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x000001D2C1F20BC0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
19:58:45 (34024): wrapper (7.9.26016): starting
19:58:45 (34024): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\26\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3849878} normal block at 0x000001DEB5DAD550, 8 bytes long.
 Data: <        > 00 00 CF B5 DE 01 00 00 
..\lib\diagnostics_win.cpp(417) : {3848641} normal block at 0x000001DEB7B74040, 1080 bytes long.
 Data: <T               > 54 B4 00 00 CD CD CD CD F0 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x000001DEB5DA1340, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
20:20:32 (30608): wrapper (7.9.26016): starting
20:20:32 (30608): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\26\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:40:02 (30608): C:/Windows/system32/cmd.exe exited; CPU time 8284.843750
22:40:02 (30608): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 172441719 bytes.
Dumping objects ->
{3849966} normal block at 0x000001FEE3C90DD0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3849955} normal block at 0x000001FEE1F85480, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3849944} normal block at 0x000001FEE1F85410, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3849933} normal block at 0x000001FEE1F856B0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3849922} normal block at 0x000001FEE1F85330, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3849891} normal block at 0x000001FEE3D08EF0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3849878} normal block at 0x000001FEE1F7D640, 8 bytes long.
 Data: <  O&#226;&#254;   > 00 00 4F E2 FE 01 00 00 
{3848642} normal block at 0x000001FEE1F7E270, 8 bytes long.
 Data: <&#160;8&#214;&#227;&#254;   > A0 38 D6 E3 FE 01 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x000001FEE1F71700, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001FEE1F728A0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x000001FEE1F85EB0, 16 bytes long.
 Data: < o&#248;&#225;&#254;           > 18 6F F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001FEE1F86720, 16 bytes long.
 Data: <&#240;n&#248;&#225;&#254;           > F0 6E F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001FEE1F800C0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x000001FEE1F86810, 16 bytes long.
 Data: <&#200;n&#248;&#225;&#254;           > C8 6E F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001FEE1F86360, 16 bytes long.
 Data: <&#160;n&#248;&#225;&#254;           > A0 6E F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001FEE1F86A40, 16 bytes long.
 Data: <xn&#248;&#225;&#254;           > 78 6E F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001FEE1F86310, 16 bytes long.
 Data: <Pn&#248;&#225;&#254;           > 50 6E F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001FEE1F85720, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x000001FEE1F85E10, 16 bytes long.
 Data: <  &#247;&#225;&#254;           > 18 00 F7 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001FEE1F7F820, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x000001FEE1F862C0, 16 bytes long.
 Data: <&#240;&#255;&#246;&#225;&#254;           > F0 FF F6 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001FEE1F86040, 16 bytes long.
 Data: <&#200;&#255;&#246;&#225;&#254;           > C8 FF F6 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001FEE1F86220, 16 bytes long.
 Data: <&#160;&#255;&#246;&#225;&#254;           > A0 FF F6 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001FEE1F85E60, 16 bytes long.
 Data: <x&#255;&#246;&#225;&#254;           > 78 FF F6 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001FEE1F861D0, 16 bytes long.
 Data: <P&#255;&#246;&#225;&#254;           > 50 FF F6 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001FEE1F85DC0, 16 bytes long.
 Data: <(&#255;&#246;&#225;&#254;           > 28 FF F6 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001FEE1F7FBE0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x000001FEE1F85D20, 16 bytes long.
 Data: < &#255;&#246;&#225;&#254;           > 00 FF F6 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001FEE1F6FF00, 320 bytes long.
 Data: < ]&#248;&#225;&#254;   &#224;&#251;&#247;&#225;&#254;   > 20 5D F8 E1 FE 01 00 00 E0 FB F7 E1 FE 01 00 00 
{275} normal block at 0x000001FEE1F85CD0, 16 bytes long.
 Data: <0n&#248;&#225;&#254;           > 30 6E F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001FEE1F85F50, 16 bytes long.
 Data: < n&#248;&#225;&#254;           > 08 6E F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001FEE1F80000, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x000001FEE1F869F0, 16 bytes long.
 Data: <&#224;m&#248;&#225;&#254;           > E0 6D F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001FEE1F7FDC0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x000001FEE1F860E0, 16 bytes long.
 Data: <(m&#248;&#225;&#254;           > 28 6D F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001FEE1F86680, 16 bytes long.
 Data: < m&#248;&#225;&#254;           > 00 6D F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001FEE1F86400, 16 bytes long.
 Data: <&#216;l&#248;&#225;&#254;           > D8 6C F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001FEE1F85D70, 16 bytes long.
 Data: <&#176;l&#248;&#225;&#254;           > B0 6C F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001FEE1F85FF0, 16 bytes long.
 Data: < l&#248;&#225;&#254;           > 88 6C F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001FEE1F85C80, 16 bytes long.
 Data: <`l&#248;&#225;&#254;           > 60 6C F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001FEE1F866D0, 16 bytes long.
 Data: <&#240;T&#248;&#225;&#254;           > F0 54 F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001FEE1F854F0, 40 bytes long.
 Data: <&#208;f&#248;&#225;&#254;   &#240;&#142;&#208;&#227;&#254;   > D0 66 F8 E1 FE 01 00 00 F0 8E D0 E3 FE 01 00 00 
{261} normal block at 0x000001FEE1F86180, 16 bytes long.
 Data: <@l&#248;&#225;&#254;           > 40 6C F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001FEE1F868B0, 16 bytes long.
 Data: < l&#248;&#225;&#254;           > 18 6C F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001FEE1F7FD60, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x000001FEE1F86950, 16 bytes long.
 Data: <&#240;k&#248;&#225;&#254;           > F0 6B F8 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001FEE1F86BF0, 992 bytes long.
 Data: <Pi&#248;&#225;&#254;   `&#253;&#247;&#225;&#254;   > 50 69 F8 E1 FE 01 00 00 60 FD F7 E1 FE 01 00 00 
{93} normal block at 0x000001FEE1F7F9A0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x000001FEE1F7D9B0, 16 bytes long.
 Data: <@&#234;&#246;&#225;&#254;           > 40 EA F6 E1 FE 01 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x000001FEE1F6EA40, 40 bytes long.
 Data: <&#176;&#217;&#247;&#225;&#254;   &#160;&#249;&#247;&#225;&#254;   > B0 D9 F7 E1 FE 01 00 00 A0 F9 F7 E1 FE 01 00 00 
{70} normal block at 0x000001FEE1F7DFA0, 16 bytes long.
 Data: < &#234;&#165; &#247;           > 80 EA A5 02 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001FEE1F7DF50, 16 bytes long.
 Data: <@&#233;&#165; &#247;           > 40 E9 A5 02 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001FEE1F7E1D0, 16 bytes long.
 Data: <&#248;W&#162; &#247;           > F8 57 A2 02 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001FEE1F7D5A0, 16 bytes long.
 Data: <&#216;W&#162; &#247;           > D8 57 A2 02 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001FEE1F7E180, 16 bytes long.
 Data: <P &#162; &#247;           > 50 04 A2 02 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001FEE1F7D730, 16 bytes long.
 Data: <0 &#162; &#247;           > 30 04 A2 02 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001FEE1F7DD20, 16 bytes long.
 Data: <&#224; &#162; &#247;           > E0 02 A2 02 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001FEE1F7DCD0, 16 bytes long.
 Data: <  &#162; &#247;           > 10 04 A2 02 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001FEE1F7E090, 16 bytes long.
 Data: <p &#162; &#247;           > 70 04 A2 02 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001FEE1F7DAA0, 16 bytes long.
 Data: < &#192;&#160; &#247;           > 18 C0 A0 02 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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