Task 38580353
| Name | JNK1_A21_A33_r0_1-QUICO_ATM_GAFF2_LOMAP_JNK1_2-0-5-RND3321_0 |
| Workunit | 31545196 |
| Created | 11 Dec 2025, 14:29:24 UTC |
| Sent | 11 Dec 2025, 14:29:29 UTC |
| Report deadline | 16 Dec 2025, 14:29:29 UTC |
| Received | 14 Dec 2025, 9:53:25 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 630626 |
| Run time | 2 days 10 hours 25 min 58 sec |
| CPU time | 1 days 2 hours 49 min 11 sec |
| Validate state | Valid |
| Credit | 750,000.00 |
| Device peak FLOPS | 40,330.12 GFLOPS |
| Application version | ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121) windows_x86_64 |
| Peak working set size | 700.25 MB |
| Peak swap size | 5.43 GB |
| Peak disk usage | 3.50 GB |
Stderr output
<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:31:37 (29360): wrapper (7.9.26016): starting
09:31:37 (29360): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A21_A33_0.pdb
QB_A21_A33_0.xml
QB_A21_A33_equil.pdb
QB_A21_A33.inpcrd
QB_A21_A33_input.yaml
QB_A21_A33_mdlambda.pdb
QB_A21_A33_min.pdb
QB_A21_A33_npt.pdb
QB_A21_A33_out_merged_nowater.pdb
QB_A21_A33.pdb
QB_A21_A33.prmtop
QB_A21_A33_sys.xml
QB_A21_A33_therm.pdb
run.bat
run.sh
09:31:38 (29360): Library/usr/bin/tar.exe exited; CPU time 0.015625
09:31:38 (29360): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\12\Scripts' which is not on PATH.
Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Running command pip subprocess to install build dependencies
Using pip 24.3.1 from C:\ProgramData\BOINC\slots\12\Lib\site-packages\pip (python 3.11)
Collecting setuptools
Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/a3/dc/17031897dae0efacfea57dfd3a82fdd2a2aeb58e0ff71b77b87e44edc772/setuptools-80.9.0-py3-none-any.whl.metadata
Using cached setuptools-80.9.0-py3-none-any.whl.metadata (6.6 kB)
Collecting setuptools-scm>=8
Obtaining dependency information for setuptools-scm>=8 from https://files.pythonhosted.org/packages/3d/ea/ac2bf868899d0d2e82ef72d350d97a846110c709bacf2d968431576ca915/setuptools_scm-9.2.2-py3-none-any.whl.metadata
Downloading setuptools_scm-9.2.2-py3-none-any.whl.metadata (7.7 kB)
Collecting packaging>=20 (from setuptools-scm>=8)
Obtaining dependency information for packaging>=20 from https://files.pythonhosted.org/packages/20/12/38679034af332785aac8774540895e234f4d07f7545804097de4b666afd8/packaging-25.0-py3-none-any.whl.metadata
Using cached packaging-25.0-py3-none-any.whl.metadata (3.3 kB)
Using cached setuptools-80.9.0-py3-none-any.whl (1.2 MB)
Downloading setuptools_scm-9.2.2-py3-none-any.whl (62 kB)
Using cached packaging-25.0-py3-none-any.whl (66 kB)
Installing collected packages: setuptools, packaging, setuptools-scm
Creating C:\ProgramData\BOINC\slots\12\pip-build-env-0t6hu6tb\overlay\Scripts
Successfully installed packaging-25.0 setuptools-80.9.0 setuptools-scm-9.2.2
Running command Getting requirements to build wheel
C:\ProgramData\BOINC\slots\12\pip-build-env-0t6hu6tb\overlay\Lib\site-packages\setuptools_scm\_integration\version_inference.py:51: UserWarning: version of None already set
warnings.warn(self.message)
running egg_info
writing atom_openmm.egg-info\PKG-INFO
writing dependency_links to atom_openmm.egg-info\dependency_links.txt
writing entry points to atom_openmm.egg-info\entry_points.txt
writing requirements to atom_openmm.egg-info\requires.txt
writing top-level names to atom_openmm.egg-info\top_level.txt
listing git files failed - pretending there aren't any
reading manifest file 'atom_openmm.egg-info\SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE'
writing manifest file 'atom_openmm.egg-info\SOURCES.txt'
Running command Preparing metadata (pyproject.toml)
C:\ProgramData\BOINC\slots\12\pip-build-env-0t6hu6tb\overlay\Lib\site-packages\setuptools_scm\_integration\version_inference.py:51: UserWarning: version of None already set
warnings.warn(self.message)
running dist_info
creating C:\ProgramData\BOINC\slots\12\pip-modern-metadata-088b6ttm\atom_openmm.egg-info
writing C:\ProgramData\BOINC\slots\12\pip-modern-metadata-088b6ttm\atom_openmm.egg-info\PKG-INFO
writing dependency_links to C:\ProgramData\BOINC\slots\12\pip-modern-metadata-088b6ttm\atom_openmm.egg-info\dependency_links.txt
writing entry points to C:\ProgramData\BOINC\slots\12\pip-modern-metadata-088b6ttm\atom_openmm.egg-info\entry_points.txt
writing requirements to C:\ProgramData\BOINC\slots\12\pip-modern-metadata-088b6ttm\atom_openmm.egg-info\requires.txt
writing top-level names to C:\ProgramData\BOINC\slots\12\pip-modern-metadata-088b6ttm\atom_openmm.egg-info\top_level.txt
writing manifest file 'C:\ProgramData\BOINC\slots\12\pip-modern-metadata-088b6ttm\atom_openmm.egg-info\SOURCES.txt'
listing git files failed - pretending there aren't any
reading manifest file 'C:\ProgramData\BOINC\slots\12\pip-modern-metadata-088b6ttm\atom_openmm.egg-info\SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE'
writing manifest file 'C:\ProgramData\BOINC\slots\12\pip-modern-metadata-088b6ttm\atom_openmm.egg-info\SOURCES.txt'
creating 'C:\ProgramData\BOINC\slots\12\pip-modern-metadata-088b6ttm\atom_openmm-8.4.0.dist-info'
Running command Building wheel for atom-openmm (pyproject.toml)
C:\ProgramData\BOINC\slots\12\pip-build-env-0t6hu6tb\overlay\Lib\site-packages\setuptools_scm\_integration\version_inference.py:51: UserWarning: version of None already set
warnings.warn(self.message)
running bdist_wheel
running build
running build_py
creating build\lib\atom_openmm
copying atom_openmm\abfe_explicit.py -> build\lib\atom_openmm
copying atom_openmm\abfe_production.py -> build\lib\atom_openmm
copying atom_openmm\abfe_structprep.py -> build\lib\atom_openmm
copying atom_openmm\async_re.py -> build\lib\atom_openmm
copying atom_openmm\gibbs_sampling.py -> build\lib\atom_openmm
copying atom_openmm\local_openmm_transport.py -> build\lib\atom_openmm
copying atom_openmm\make_atm_system_from_amber.py -> build\lib\atom_openmm
copying atom_openmm\make_atm_system_from_pdb.py -> build\lib\atom_openmm
copying atom_openmm\make_atm_system_from_rcpt_lig.py -> build\lib\atom_openmm
copying atom_openmm\ommreplica.py -> build\lib\atom_openmm
copying atom_openmm\ommsystem.py -> build\lib\atom_openmm
copying atom_openmm\ommworker.py -> build\lib\atom_openmm
copying atom_openmm\openmm_async_re.py -> build\lib\atom_openmm
copying atom_openmm\rbfe_explicit.py -> build\lib\atom_openmm
copying atom_openmm\rbfe_production.py -> build\lib\atom_openmm
copying atom_openmm\rbfe_structprep.py -> build\lib\atom_openmm
copying atom_openmm\temperatureRE_explicit.py -> build\lib\atom_openmm
copying atom_openmm\transport.py -> build\lib\atom_openmm
copying atom_openmm\uwham.py -> build\lib\atom_openmm
copying atom_openmm\__init__.py -> build\lib\atom_openmm
creating build\lib\atom_openmm\utils
copying atom_openmm\utils\AtomUtils.py -> build\lib\atom_openmm\utils
copying atom_openmm\utils\config.py -> build\lib\atom_openmm\utils
copying atom_openmm\utils\singal_guard.py -> build\lib\atom_openmm\utils
copying atom_openmm\utils\timer.py -> build\lib\atom_openmm\utils
copying atom_openmm\utils\__init__.py -> build\lib\atom_openmm\utils
running egg_info
writing atom_openmm.egg-info\PKG-INFO
writing dependency_links to atom_openmm.egg-info\dependency_links.txt
writing entry points to atom_openmm.egg-info\entry_points.txt
writing requirements to atom_openmm.egg-info\requires.txt
writing top-level names to atom_openmm.egg-info\top_level.txt
listing git files failed - pretending there aren't any
reading manifest file 'atom_openmm.egg-info\SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE'
writing manifest file 'atom_openmm.egg-info\SOURCES.txt'
copying atom_openmm\utils\logging.conf -> build\lib\atom_openmm\utils
installing to build\bdist.win-amd64\wheel
running install
running install_lib
creating build\bdist.win-amd64\wheel
creating build\bdist.win-amd64\wheel\atom_openmm
copying build\lib\atom_openmm\abfe_explicit.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\abfe_production.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\abfe_structprep.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\async_re.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\gibbs_sampling.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\local_openmm_transport.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\make_atm_system_from_amber.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\make_atm_system_from_pdb.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\make_atm_system_from_rcpt_lig.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\ommreplica.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\ommsystem.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\ommworker.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\openmm_async_re.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\rbfe_explicit.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\rbfe_production.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\rbfe_structprep.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\temperatureRE_explicit.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\transport.py -> build\bdist.win-amd64\wheel\.\atom_openmm
creating build\bdist.win-amd64\wheel\atom_openmm\utils
copying build\lib\atom_openmm\utils\AtomUtils.py -> build\bdist.win-amd64\wheel\.\atom_openmm\utils
copying build\lib\atom_openmm\utils\config.py -> build\bdist.win-amd64\wheel\.\atom_openmm\utils
copying build\lib\atom_openmm\utils\logging.conf -> build\bdist.win-amd64\wheel\.\atom_openmm\utils
copying build\lib\atom_openmm\utils\singal_guard.py -> build\bdist.win-amd64\wheel\.\atom_openmm\utils
copying build\lib\atom_openmm\utils\timer.py -> build\bdist.win-amd64\wheel\.\atom_openmm\utils
copying build\lib\atom_openmm\utils\__init__.py -> build\bdist.win-amd64\wheel\.\atom_openmm\utils
copying build\lib\atom_openmm\uwham.py -> build\bdist.win-amd64\wheel\.\atom_openmm
copying build\lib\atom_openmm\__init__.py -> build\bdist.win-amd64\wheel\.\atom_openmm
running install_egg_info
Copying atom_openmm.egg-info to build\bdist.win-amd64\wheel\.\atom_openmm-8.4.0-py3.11.egg-info
running install_scripts
creating build\bdist.win-amd64\wheel\atom_openmm-8.4.0.dist-info\WHEEL
creating 'C:\ProgramData\BOINC\slots\12\pip-wheel-ot37z3j6\.tmp-vuys240g\atom_openmm-8.4.0-py3-none-any.whl' and adding 'build\bdist.win-amd64\wheel' to it
adding 'atom_openmm/__init__.py'
adding 'atom_openmm/abfe_explicit.py'
adding 'atom_openmm/abfe_production.py'
adding 'atom_openmm/abfe_structprep.py'
adding 'atom_openmm/async_re.py'
adding 'atom_openmm/gibbs_sampling.py'
adding 'atom_openmm/local_openmm_transport.py'
adding 'atom_openmm/make_atm_system_from_amber.py'
adding 'atom_openmm/make_atm_system_from_pdb.py'
adding 'atom_openmm/make_atm_system_from_rcpt_lig.py'
adding 'atom_openmm/ommreplica.py'
adding 'atom_openmm/ommsystem.py'
adding 'atom_openmm/ommworker.py'
adding 'atom_openmm/openmm_async_re.py'
adding 'atom_openmm/rbfe_explicit.py'
adding 'atom_openmm/rbfe_production.py'
adding 'atom_openmm/rbfe_structprep.py'
adding 'atom_openmm/temperatureRE_explicit.py'
adding 'atom_openmm/transport.py'
adding 'atom_openmm/uwham.py'
adding 'atom_openmm/utils/AtomUtils.py'
adding 'atom_openmm/utils/__init__.py'
adding 'atom_openmm/utils/config.py'
adding 'atom_openmm/utils/logging.conf'
adding 'atom_openmm/utils/singal_guard.py'
adding 'atom_openmm/utils/timer.py'
adding 'atom_openmm-8.4.0.dist-info/licenses/LICENSE'
adding 'atom_openmm-8.4.0.dist-info/METADATA'
adding 'atom_openmm-8.4.0.dist-info/WHEEL'
adding 'atom_openmm-8.4.0.dist-info/entry_points.txt'
adding 'atom_openmm-8.4.0.dist-info/top_level.txt'
adding 'atom_openmm-8.4.0.dist-info/RECORD'
removing build\bdist.win-amd64\wheel
WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\12\Scripts' which is not on PATH.
Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835531} normal block at 0x0000014551ECE0C0, 8 bytes long.
Data: < IRE > 00 00 49 52 45 01 00 00
..\lib\diagnostics_win.cpp(417) : {3833960} normal block at 0x0000014553C78C70, 1080 bytes long.
Data: < x > D8 78 00 00 CD CD CD CD 00 03 00 00 00 00 00 00
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x0000014551EC5DE0, 260 bytes long.
Data: < > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
Object dump complete.
11:37:41 (8832): wrapper (7.9.26016): starting
11:37:41 (8832): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x00000197F3726BE0, 8 bytes long.
Data: < > 00 00 A9 F3 97 01 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x00000197F3727480, 1080 bytes long.
Data: <ps > 70 73 00 00 CD CD CD CD A8 01 00 00 00 00 00 00
Object dump complete.
11:42:32 (34656): wrapper (7.9.26016): starting
11:42:32 (34656): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x000001EF96C964C0, 8 bytes long.
Data: < > 00 00 C3 96 EF 01 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x000001EF96C97490, 1080 bytes long.
Data: <L > 4C 88 00 00 CD CD CD CD AC 01 00 00 00 00 00 00
Object dump complete.
11:50:27 (31308): wrapper (7.9.26016): starting
11:50:27 (31308): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x00000230C74E6280, 8 bytes long.
Data: < 0 > 00 00 81 C7 30 02 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x00000230C74E7480, 1080 bytes long.
Data: < l > 10 6C 00 00 CD CD CD CD E0 00 00 00 00 00 00 00
Object dump complete.
11:55:23 (9620): wrapper (7.9.26016): starting
11:55:23 (9620): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x00000230D0C263C0, 8 bytes long.
Data: < S 0 > 00 00 53 D2 30 02 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x00000230D0C27480, 1080 bytes long.
Data: < r > A8 72 00 00 CD CD CD CD B4 01 00 00 00 00 00 00
Object dump complete.
12:02:51 (33580): wrapper (7.9.26016): starting
12:02:51 (33580): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x0000020B3D7A6830, 8 bytes long.
Data: < = > 00 00 B0 3D 0B 02 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x0000020B3D7A7080, 1080 bytes long.
Data: < | > A8 7C 00 00 CD CD CD CD B4 01 00 00 00 00 00 00
Object dump complete.
12:10:44 (22984): wrapper (7.9.26016): starting
12:10:44 (22984): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x0000022FA55163E0, 8 bytes long.
Data: < / > 00 00 A8 A5 2F 02 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x0000022FA55170E0, 1080 bytes long.
Data: <X > 58 8B 00 00 CD CD CD CD A8 01 00 00 00 00 00 00
Object dump complete.
12:15:58 (33676): wrapper (7.9.26016): starting
12:15:58 (33676): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x0000027232DD69F0, 8 bytes long.
Data: < !3r > 00 00 21 33 72 02 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x0000027232DD6FC0, 1080 bytes long.
Data: < G > 08 47 00 00 CD CD CD CD A8 01 00 00 00 00 00 00
Object dump complete.
12:21:46 (11732): wrapper (7.9.26016): starting
12:21:46 (11732): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x0000020FB4846350, 8 bytes long.
Data: < > 00 00 80 B4 0F 02 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x0000020FB4847460, 1080 bytes long.
Data: < { > E0 7B 00 00 CD CD CD CD B4 01 00 00 00 00 00 00
Object dump complete.
12:27:57 (24244): wrapper (7.9.26016): starting
12:27:57 (24244): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x000001CB25C16630, 8 bytes long.
Data: < % > 00 00 BE 25 CB 01 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x000001CB25C16FC0, 1080 bytes long.
Data: < > 90 83 00 00 CD CD CD CD A8 01 00 00 00 00 00 00
Object dump complete.
12:48:39 (28048): wrapper (7.9.26016): starting
12:48:39 (28048): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x000001B09A936A60, 8 bytes long.
Data: < > 00 00 D1 9A B0 01 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x000001B09A937490, 1080 bytes long.
Data: < > 08 85 00 00 CD CD CD CD A0 01 00 00 00 00 00 00
Object dump complete.
12:59:48 (26408): wrapper (7.9.26016): starting
12:59:48 (26408): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x000002A5FB1E7570, 8 bytes long.
Data: < j > 00 00 6A FB A5 02 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x000002A5FB1E84A0, 1080 bytes long.
Data: < > D8 82 00 00 CD CD CD CD B4 01 00 00 00 00 00 00
Object dump complete.
15:36:15 (33004): wrapper (7.9.26016): starting
15:36:15 (33004): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x0000023E3F326C90, 8 bytes long.
Data: < .?> > 00 00 2E 3F 3E 02 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x0000023E3F327490, 1080 bytes long.
Data: <`l > 60 6C 00 00 CD CD CD CD A8 01 00 00 00 00 00 00
Object dump complete.
12:01:26 (42376): wrapper (7.9.26016): starting
12:01:26 (42376): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x000002711A5F7950, 8 bytes long.
Data: < q > 00 00 AB 1A 71 02 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x000002711A5F8120, 1080 bytes long.
Data: < ) > 08 29 00 00 CD CD CD CD A8 01 00 00 00 00 00 00
Object dump complete.
12:07:53 (40624): wrapper (7.9.26016): starting
12:07:53 (40624): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x000001FA13A665F0, 8 bytes long.
Data: < > 00 00 F2 13 FA 01 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x000001FA13A67480, 1080 bytes long.
Data: < > C8 AA 00 00 CD CD CD CD AC 01 00 00 00 00 00 00
Object dump complete.
12:15:52 (21500): wrapper (7.9.26016): starting
12:15:52 (21500): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x00000201361C6F00, 8 bytes long.
Data: < W6 > 00 00 57 36 01 02 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x00000201361C7480, 1080 bytes long.
Data: <X| > 58 7C 00 00 CD CD CD CD B4 01 00 00 00 00 00 00
Object dump complete.
12:20:23 (43668): wrapper (7.9.26016): starting
12:20:23 (43668): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {1876} normal block at 0x000001E0926A69A0, 8 bytes long.
Data: < > 00 00 AA 92 E0 01 00 00
..\lib\diagnostics_win.cpp(417) : {305} normal block at 0x000001E0926A6FC0, 1080 bytes long.
Data: < > F8 98 00 00 CD CD CD CD B4 01 00 00 00 00 00 00
Object dump complete.
13:17:09 (33824): wrapper (7.9.26016): starting
13:17:09 (33824): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\12\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
04:52:16 (33824): C:/Windows/system32/cmd.exe exited; CPU time 24403.968750
04:52:16 (33824): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 1180526765 bytes.
Dumping objects ->
{1964} normal block at 0x0000025D41FB5880, 48 bytes long.
Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
{1953} normal block at 0x0000025D41FB5B90, 48 bytes long.
Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
{1942} normal block at 0x0000025D41FB5B20, 48 bytes long.
Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61
{1931} normal block at 0x0000025D41FB57A0, 48 bytes long.
Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
{1920} normal block at 0x0000025D41FB5490, 48 bytes long.
Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61
{1889} normal block at 0x0000025D41F9F5F0, 64 bytes long.
Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
..\api\boinc_api.cpp(309) : {1876} normal block at 0x0000025D41FB6D70, 8 bytes long.
Data: < .B] > 00 00 2E 42 5D 02 00 00
{306} normal block at 0x0000025D41FB6D20, 8 bytes long.
Data: < t A] > 80 74 FB 41 5D 02 00 00
{297} normal block at 0x0000025D41FA2170, 80 bytes long.
Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C
{296} normal block at 0x0000025D41FB63C0, 16 bytes long.
Data: < s A] > 88 73 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{295} normal block at 0x0000025D41FB6190, 16 bytes long.
Data: <`s A] > 60 73 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{294} normal block at 0x0000025D41FB06B0, 32 bytes long.
Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D
{293} normal block at 0x0000025D41FB6C80, 16 bytes long.
Data: <8s A] > 38 73 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{292} normal block at 0x0000025D41FB6FF0, 16 bytes long.
Data: < s A] > 10 73 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{291} normal block at 0x0000025D41FB6C30, 16 bytes long.
Data: < r A] > E8 72 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{290} normal block at 0x0000025D41FB6370, 16 bytes long.
Data: < r A] > C0 72 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{289} normal block at 0x0000025D41FB56C0, 48 bytes long.
Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F
{288} normal block at 0x0000025D41FB6230, 16 bytes long.
Data: < A] > 88 0A FA 41 5D 02 00 00 00 00 00 00 00 00 00 00
{287} normal block at 0x0000025D41FAFA50, 32 bytes long.
Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69
{286} normal block at 0x0000025D41FB6500, 16 bytes long.
Data: <` A] > 60 0A FA 41 5D 02 00 00 00 00 00 00 00 00 00 00
{284} normal block at 0x0000025D41FB6BE0, 16 bytes long.
Data: <8 A] > 38 0A FA 41 5D 02 00 00 00 00 00 00 00 00 00 00
{283} normal block at 0x0000025D41FB60F0, 16 bytes long.
Data: < A] > 10 0A FA 41 5D 02 00 00 00 00 00 00 00 00 00 00
{282} normal block at 0x0000025D41FB6B90, 16 bytes long.
Data: < A] > E8 09 FA 41 5D 02 00 00 00 00 00 00 00 00 00 00
{281} normal block at 0x0000025D41FB6B40, 16 bytes long.
Data: < A] > C0 09 FA 41 5D 02 00 00 00 00 00 00 00 00 00 00
{280} normal block at 0x0000025D41FB6F50, 16 bytes long.
Data: < A] > 98 09 FA 41 5D 02 00 00 00 00 00 00 00 00 00 00
{279} normal block at 0x0000025D41FAFD50, 32 bytes long.
Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55
{278} normal block at 0x0000025D41FB6AA0, 16 bytes long.
Data: <p A] > 70 09 FA 41 5D 02 00 00 00 00 00 00 00 00 00 00
{277} normal block at 0x0000025D41FA0970, 320 bytes long.
Data: < j A] P A] > A0 6A FB 41 5D 02 00 00 50 FD FA 41 5D 02 00 00
{276} normal block at 0x0000025D41FB65A0, 16 bytes long.
Data: < r A] > A0 72 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{275} normal block at 0x0000025D41FB6140, 16 bytes long.
Data: <xr A] > 78 72 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{274} normal block at 0x0000025D41FB0650, 32 bytes long.
Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65
{273} normal block at 0x0000025D41FB6A50, 16 bytes long.
Data: <Pr A] > 50 72 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{272} normal block at 0x0000025D41FAFAB0, 32 bytes long.
Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62
{271} normal block at 0x0000025D41FB6CD0, 16 bytes long.
Data: < q A] > 98 71 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{270} normal block at 0x0000025D41FB6730, 16 bytes long.
Data: <pq A] > 70 71 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{269} normal block at 0x0000025D41FB6820, 16 bytes long.
Data: <Hq A] > 48 71 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{268} normal block at 0x0000025D41FB6AF0, 16 bytes long.
Data: < q A] > 20 71 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{267} normal block at 0x0000025D41FB6320, 16 bytes long.
Data: < p A] > F8 70 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{266} normal block at 0x0000025D41FB6280, 16 bytes long.
Data: < p A] > D0 70 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{264} normal block at 0x0000025D41FB6F00, 16 bytes long.
Data: <0W A] > 30 57 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{263} normal block at 0x0000025D41FB5730, 40 bytes long.
Data: < o A] A] > 00 6F FB 41 5D 02 00 00 F0 F5 F9 41 5D 02 00 00
{262} normal block at 0x0000025D41FB6460, 16 bytes long.
Data: < p A] > B0 70 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{261} normal block at 0x0000025D41FB69B0, 16 bytes long.
Data: < p A] > 88 70 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{260} normal block at 0x0000025D41FAFF30, 32 bytes long.
Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F
{259} normal block at 0x0000025D41FB67D0, 16 bytes long.
Data: <`p A] > 60 70 FB 41 5D 02 00 00 00 00 00 00 00 00 00 00
{258} normal block at 0x0000025D41FB7060, 992 bytes long.
Data: < g A] 0 A] > D0 67 FB 41 5D 02 00 00 30 FF FA 41 5D 02 00 00
{94} normal block at 0x0000025D41FB0530, 32 bytes long.
Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F
{93} normal block at 0x0000025D41FAE4A0, 16 bytes long.
Data: < A] > 90 F1 F9 41 5D 02 00 00 00 00 00 00 00 00 00 00
{92} normal block at 0x0000025D41F9F190, 40 bytes long.
Data: < A] 0 A] > A0 E4 FA 41 5D 02 00 00 30 05 FB 41 5D 02 00 00
{71} normal block at 0x0000025D41FAE400, 16 bytes long.
Data: < > 80 EA 82 07 F7 7F 00 00 00 00 00 00 00 00 00 00
{70} normal block at 0x0000025D41FAD8C0, 16 bytes long.
Data: <@ > 40 E9 82 07 F7 7F 00 00 00 00 00 00 00 00 00 00
{69} normal block at 0x0000025D41FAE130, 16 bytes long.
Data: < W > F8 57 7F 07 F7 7F 00 00 00 00 00 00 00 00 00 00
{68} normal block at 0x0000025D41FAD730, 16 bytes long.
Data: < W > D8 57 7F 07 F7 7F 00 00 00 00 00 00 00 00 00 00
{67} normal block at 0x0000025D41FAE540, 16 bytes long.
Data: <P > 50 04 7F 07 F7 7F 00 00 00 00 00 00 00 00 00 00
{66} normal block at 0x0000025D41FADDC0, 16 bytes long.
Data: <0 > 30 04 7F 07 F7 7F 00 00 00 00 00 00 00 00 00 00
{65} normal block at 0x0000025D41FAD690, 16 bytes long.
Data: < > E0 02 7F 07 F7 7F 00 00 00 00 00 00 00 00 00 00
{64} normal block at 0x0000025D41FADD20, 16 bytes long.
Data: < > 10 04 7F 07 F7 7F 00 00 00 00 00 00 00 00 00 00
{63} normal block at 0x0000025D41FAE310, 16 bytes long.
Data: <p > 70 04 7F 07 F7 7F 00 00 00 00 00 00 00 00 00 00
{62} normal block at 0x0000025D41FAD910, 16 bytes long.
Data: < } > 18 C0 7D 07 F7 7F 00 00 00 00 00 00 00 00 00 00
Object dump complete.
</stderr_txt>
]]>
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