Task 38580322

Name	JNK1_A20_A05_r0_1-QUICO_ATM_GAFF2_LOMAP_JNK1_2-0-5-RND6480_0
Workunit	31545171
Created	11 Dec 2025, 14:27:18 UTC
Sent	11 Dec 2025, 14:27:24 UTC
Report deadline	16 Dec 2025, 14:27:24 UTC
Received	14 Dec 2025, 0:55:27 UTC
Server state	Over
Outcome	Computation error
Client state	Compute error
Exit status	195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID	595174
Run time	34 sec
CPU time	1 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	2,723.28 GFLOPS
Application version	ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121) x86_64-pc-linux-gnu
Peak working set size	43.11 MB
Peak swap size	54.42 MB
Peak disk usage	1.42 GB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
2025-12-13 16:02:53 (185663): wrapper (8.1.26018): starting
2025-12-13 16:03:13 (185663): wrapper: running bin/python (bin/conda-unpack)
2025-12-13 16:03:13 (185663): wrapper: created child process 185677
2025-12-13 16:03:14 (185663): bin/python exited; CPU time 0.075408
2025-12-13 16:03:14 (185663): wrapper: running bin/tar (xjvf input.tar.bz2)
2025-12-13 16:03:14 (185663): wrapper: created child process 185678
2025-12-13 16:03:16 (185663): bin/tar exited; CPU time 0.968756
2025-12-13 16:03:16 (185663): wrapper: running bin/bash (run.sh)
2025-12-13 16:03:16 (185663): wrapper: created child process 185682
+ echo 'Setup environment'
+ source bin/activate
++ _conda_pack_activate
++ local _CONDA_SHELL_FLAVOR
++ '[' -n x ']'
++ _CONDA_SHELL_FLAVOR=bash
++ local script_dir
++ case "$_CONDA_SHELL_FLAVOR" in
+++ dirname bin/activate
++ script_dir=bin
+++ cd bin
+++ pwd
++ local full_path_script_dir=/var/lib/boinc-client/slots/0/bin
+++ dirname /var/lib/boinc-client/slots/0/bin
++ local full_path_env=/var/lib/boinc-client/slots/0
+++ basename /var/lib/boinc-client/slots/0
++ local env_name=0
++ '[' -n '' ']'
++ export CONDA_PREFIX=/var/lib/boinc-client/slots/0
++ CONDA_PREFIX=/var/lib/boinc-client/slots/0
++ export _CONDA_PACK_OLD_PS1=
++ _CONDA_PACK_OLD_PS1=
++ PATH=/var/lib/boinc-client/slots/0/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin:.
++ PS1='(0) '
++ case "$_CONDA_SHELL_FLAVOR" in
++ hash -r
++ local _script_dir=/var/lib/boinc-client/slots/0/etc/conda/activate.d
++ '[' -d /var/lib/boinc-client/slots/0/etc/conda/activate.d ']'
+ export PATH=/var/lib/boinc-client/slots/0:/var/lib/boinc-client/slots/0/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin:.
+ PATH=/var/lib/boinc-client/slots/0:/var/lib/boinc-client/slots/0/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin:.
+ echo 'Create a temporary directory'
+ export TMP=/var/lib/boinc-client/slots/0/tmp
+ TMP=/var/lib/boinc-client/slots/0/tmp
+ mkdir -p /var/lib/boinc-client/slots/0/tmp
+ echo 'Configure AToM'
+ echo localhost,0:0,1,CUDA,,/var/lib/boinc-client/slots/0/tmp
+ FILE=starting_sample
+ '[' -f starting_sample ']'
+ echo 'starting_sample does not exist.'
+ echo 'Install ATM and deps'
+ python -m pip list
+ python -m pip install pyaml -v
WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d4f93853c10>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/pyaml/
WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d4f938555d0>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/pyaml/
WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d4f93855f90>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/pyaml/
WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d4f93856f50>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/pyaml/
WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d4f93857bd0>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/pyaml/
ERROR: Could not find a version that satisfies the requirement pyaml (from versions: none)
ERROR: No matching distribution found for pyaml
2025-12-13 16:03:25 (185663): bin/bash exited; CPU time 0.432491
2025-12-13 16:03:25 (185663): app exit status: 0x1
2025-12-13 16:03:25 (185663): called boinc_finish(195)

</stderr_txt>
]]>