Task 38580265

Name JNK1_A04_A12_r3_1-QUICO_ATM_GAFF2_LOMAP_JNK1_2-0-5-RND4297_0
Workunit 31545134
Created 11 Dec 2025, 14:24:07 UTC
Sent 11 Dec 2025, 14:24:11 UTC
Report deadline 16 Dec 2025, 14:24:11 UTC
Received 13 Dec 2025, 20:02:29 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 197 (0x000000C5) EXIT_TIME_LIMIT_EXCEEDED
Computer ID 638757
Run time 1 days 2 hours 48 min 8 sec
CPU time 19 hours 22 min 34 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 15,122.00 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 728.32 MB
Peak swap size 11.40 GB
Peak disk usage 3.22 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<message>
exceeded elapsed time limit 96486.82 (100000000000.00G/1036410.98G)</message>
<stderr_txt>
12:13:56 (6016): wrapper (7.9.26016): starting
12:13:56 (6016): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A04_A12_0.pdb
QB_A04_A12_0.xml
QB_A04_A12_equil.pdb
QB_A04_A12.inpcrd
QB_A04_A12_input.yaml
QB_A04_A12_mdlambda.pdb
QB_A04_A12_min.pdb
QB_A04_A12_npt.pdb
QB_A04_A12_out_merged_nowater.pdb
QB_A04_A12.pdb
QB_A04_A12.prmtop
QB_A04_A12_sys.xml
QB_A04_A12_therm.pdb
run.bat
run.sh
12:14:00 (6016): Library/usr/bin/tar.exe exited; CPU time 0.000000
12:14:00 (6016): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\28\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\28\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835180} normal block at 0x00000128C721EEB0, 8 bytes long.
 Data: <  m (   > 00 00 6D C7 28 01 00 00 
..\lib\diagnostics_win.cpp(417) : {3833952} normal block at 0x00000128C7243F00, 1080 bytes long.
 Data: <,i              > 2C 69 00 00 CD CD CD CD D0 03 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {308} normal block at 0x00000128C720D850, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2025 Universitat Pompeu Fabra