Task 38580261

Name JNK1_A04_A12_r1_1-QUICO_ATM_GAFF2_LOMAP_JNK1_2-0-5-RND1251_0
Workunit 31545132
Created 11 Dec 2025, 14:23:57 UTC
Sent 11 Dec 2025, 14:23:59 UTC
Report deadline 16 Dec 2025, 14:23:59 UTC
Received 12 Dec 2025, 11:21:42 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 197 (0x000000C5) EXIT_TIME_LIMIT_EXCEEDED
Computer ID 484079
Run time 20 hours 41 min 21 sec
CPU time 20 hours 26 min 25 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 16,202.19 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 659.30 MB
Peak swap size 2.36 GB
Peak disk usage 3.59 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<message>
exceeded elapsed time limit 74480.30 (100000000000.00G/1342636.87G)</message>
<stderr_txt>
15:41:00 (8996): wrapper (7.9.26016): starting
15:41:00 (8996): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A04_A12_0.pdb
QB_A04_A12_0.xml
QB_A04_A12_equil.pdb
QB_A04_A12.inpcrd
QB_A04_A12_input.yaml
QB_A04_A12_mdlambda.pdb
QB_A04_A12_min.pdb
QB_A04_A12_npt.pdb
QB_A04_A12_out_merged_nowater.pdb
QB_A04_A12.pdb
QB_A04_A12.prmtop
QB_A04_A12_sys.xml
QB_A04_A12_therm.pdb
run.bat
run.sh
15:41:02 (8996): Library/usr/bin/tar.exe exited; CPU time 0.000000
15:41:02 (8996): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835091} normal block at 0x000001F5DB41B9E0, 8 bytes long.
 Data: <  ?     > 00 00 3F DB F5 01 00 00 
..\lib\diagnostics_win.cpp(417) : {3833940} normal block at 0x000001F5DCF10080, 1080 bytes long.
 Data: <        0       > A4 0E 00 00 CD CD CD CD 30 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {302} normal block at 0x000001F5DB420970, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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