Task 38580049

Name JNK1_A20_A30_r1_1-QUICO_ATM_GAFF2_LOMAP_JNK1-0-5-RND8440_6
Workunit 31545052
Created 11 Dec 2025, 13:44:13 UTC
Sent 11 Dec 2025, 13:44:19 UTC
Report deadline 16 Dec 2025, 13:44:19 UTC
Received 11 Dec 2025, 14:08:53 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID 609638
Run time 9 min 47 sec
CPU time 3 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 5,116.25 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 58.36 MB
Peak swap size 43.43 MB
Peak disk usage 2.81 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<message>
操作系统无法运行 (null)。
 (0xc3) - exit code 195 (0xc3)</message>
<stderr_txt>
21:57:34 (21140): wrapper (7.9.26016): starting
21:57:34 (21140): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A20_A30_0.pdb
QB_A20_A30_0.xml
QB_A20_A30_equil.pdb
QB_A20_A30.inpcrd
QB_A20_A30_input.yaml
QB_A20_A30_mdlambda.pdb
QB_A20_A30_min.pdb
QB_A20_A30_npt.pdb
QB_A20_A30_out_merged_nowater.pdb
QB_A20_A30.pdb
QB_A20_A30.prmtop
QB_A20_A30_sys.xml
QB_A20_A30_therm.pdb
run.bat
run.sh
21:57:37 (21140): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:57:37 (21140): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'E:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  Running command git version
  git version 2.47.0.windows.1
  Running command git clone --filter=blob:none https://github.com/Acellera/atm.git 'E:\ProgramData\BOINC\slots\4\pip-req-build-fol73_7l'
  Cloning into 'E:\ProgramData\BOINC\slots\4\pip-req-build-fol73_7l'...
  error: RPC failed; curl 56 Failure when receiving data from the peer
  error: 4309 bytes of body are still expected
  fetch-pack: unexpected disconnect while reading sideband packet
  fatal: early EOF
  fatal: fetch-pack: invalid index-pack output
  fatal: could not fetch 72eafe51267c4f75d7aeda2b14cebd77291e67fc from promisor remote
  warning: Clone succeeded, but checkout failed.
  You can inspect what was checked out with 'git status'
  and retry with 'git restore --source=HEAD :/'

  error: subprocess-exited-with-error
  
  &#195;&#151; git clone --filter=blob:none https://github.com/Acellera/atm.git 'E:\ProgramData\BOINC\slots\4\pip-req-build-fol73_7l' did not run successfully.
  &#226;&#148;&#130; exit code: 128
  &#226;&#149;&#176;&#226;&#148;&#128;> See above for output.
  
  note: This error originates from a subprocess, and is likely not a problem with pip.
  full command: git clone --filter=blob:none https://github.com/Acellera/atm.git 'E:\ProgramData\BOINC\slots\4\pip-req-build-fol73_7l'
  cwd: [inherit]
error: subprocess-exited-with-error

&#195;&#151; git clone --filter=blob:none https://github.com/Acellera/atm.git 'E:\ProgramData\BOINC\slots\4\pip-req-build-fol73_7l' did not run successfully.
&#226;&#148;&#130; exit code: 128
&#226;&#149;&#176;&#226;&#148;&#128;> See above for output.

note: This error originates from a subprocess, and is likely not a problem with pip.
python.exe: can't open file 'E:\\ProgramData\\BOINC\\slots\\4\\Scripts\\rbfe_production.exe': [Errno 2] No such file or directory
22:07:03 (21140): C:/Windows/system32/cmd.exe exited; CPU time 3.906250
22:07:03 (21140): app exit status: 0x16
22:07:03 (21140): called boinc_finish(195)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 6471671 bytes.
Dumping objects ->
{3835195} normal block at 0x00000294AA0B6230, 48 bytes long.
 Data: <PATH=E:\ProgramD> 50 41 54 48 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835184} normal block at 0x00000294AA0B5CF0, 48 bytes long.
 Data: <HOME=E:\ProgramD> 48 4F 4D 45 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835173} normal block at 0x00000294AA0B69A0, 48 bytes long.
 Data: <TMP=E:\ProgramDa> 54 4D 50 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835162} normal block at 0x00000294AA0B5C80, 48 bytes long.
 Data: <TEMP=E:\ProgramD> 54 45 4D 50 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835151} normal block at 0x00000294AA0B6000, 48 bytes long.
 Data: <TMPDIR=E:\Progra> 54 4D 50 44 49 52 3D 45 3A 5C 50 72 6F 67 72 61 
{3835120} normal block at 0x00000294ABC1BF50, 64 bytes long.
 Data: <PATH=E:\ProgramD> 50 41 54 48 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835107} normal block at 0x00000294AA0934F0, 8 bytes long.
 Data: <        > 00 00 06 AA 94 02 00 00 
{3833944} normal block at 0x00000294AA0939A0, 8 bytes long.
 Data: <        > 00 EA B7 AB 94 02 00 00 
..\zip\boinc_zip.cpp(122) : {301} normal block at 0x00000294AA091000, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000294AA091F40, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{285} normal block at 0x00000294AA093770, 16 bytes long.
 Data: <X)	             > 58 29 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000294AA08F5B0, 16 bytes long.
 Data: <0)	             > 30 29 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000294AA08D100, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{282} normal block at 0x00000294AA084580, 16 bytes long.
 Data: < )	             > 08 29 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000294AA084440, 16 bytes long.
 Data: < (	             > E0 28 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000294AA0843F0, 16 bytes long.
 Data: < (	             > B8 28 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000294AA084CB0, 16 bytes long.
 Data: < (	             > 90 28 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000294AA08BE80, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{277} normal block at 0x00000294AA0843A0, 16 bytes long.
 Data: <  	             > D8 1E 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000294AA08D4C0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{275} normal block at 0x00000294AA0846C0, 16 bytes long.
 Data: <  	             > B0 1E 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000294AA084350, 16 bytes long.
 Data: <  	             > 88 1E 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000294AA084670, 16 bytes long.
 Data: <` 	             > 60 1E 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000294AA084C60, 16 bytes long.
 Data: <8 	             > 38 1E 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000294AA084300, 16 bytes long.
 Data: <  	             > 10 1E 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000294AA084C10, 16 bytes long.
 Data: <  	             > E8 1D 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000294AA08DAC0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{267} normal block at 0x00000294AA084B70, 16 bytes long.
 Data: <  	             > C0 1D 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000294AA091DC0, 320 bytes long.
 Data: <pK              > 70 4B 08 AA 94 02 00 00 C0 DA 08 AA 94 02 00 00 
{265} normal block at 0x00000294AA084080, 16 bytes long.
 Data: <p(	             > 70 28 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000294AA0848A0, 16 bytes long.
 Data: <H(	             > 48 28 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000294AA08D7C0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{262} normal block at 0x00000294AA083F40, 16 bytes long.
 Data: < (	             > 20 28 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000294AA08D0A0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{260} normal block at 0x00000294AA0849E0, 16 bytes long.
 Data: <h'	             > 68 27 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000294AA083EF0, 16 bytes long.
 Data: <@'	             > 40 27 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000294AA084530, 16 bytes long.
 Data: < '	             > 18 27 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000294AA084210, 16 bytes long.
 Data: < &	             > F0 26 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x00000294AA08F010, 16 bytes long.
 Data: < &	             > C8 26 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x00000294AA08F650, 16 bytes long.
 Data: < &	             > A0 26 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x00000294AA08F600, 16 bytes long.
 Data: <                > A0 BD 08 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x00000294AA08BDA0, 40 bytes long.
 Data: <        P       > 00 F6 08 AA 94 02 00 00 50 BF C1 AB 94 02 00 00 
{251} normal block at 0x00000294AA08F3D0, 16 bytes long.
 Data: < &	             > 80 26 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x00000294AA08F380, 16 bytes long.
 Data: <X&	             > 58 26 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{249} normal block at 0x00000294AA08D280, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{248} normal block at 0x00000294AA08F1F0, 16 bytes long.
 Data: <0&	             > 30 26 09 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{247} normal block at 0x00000294AA092630, 992 bytes long.
 Data: <                > F0 F1 08 AA 94 02 00 00 80 D2 08 AA 94 02 00 00 
{83} normal block at 0x00000294AA08D640, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{82} normal block at 0x00000294AA0841C0, 16 bytes long.
 Data: <                > 20 BA 08 AA 94 02 00 00 00 00 00 00 00 00 00 00 
{81} normal block at 0x00000294AA08BA20, 40 bytes long.
 Data: < A      @       > C0 41 08 AA 94 02 00 00 40 D6 08 AA 94 02 00 00 
{60} normal block at 0x00000294AA0847B0, 16 bytes long.
 Data: <  (a            > 80 EA 28 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000294AA084990, 16 bytes long.
 Data: <@ (a            > 40 E9 28 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000294AA0840D0, 16 bytes long.
 Data: < W%a            > F8 57 25 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x00000294AA084850, 16 bytes long.
 Data: < W%a            > D8 57 25 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x00000294AA084620, 16 bytes long.
 Data: <P %a            > 50 04 25 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x00000294AA083E00, 16 bytes long.
 Data: <0 %a            > 30 04 25 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x00000294AA084800, 16 bytes long.
 Data: <  %a            > E0 02 25 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x00000294AA084120, 16 bytes long.
 Data: <  %a            > 10 04 25 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{52} normal block at 0x00000294AA084710, 16 bytes long.
 Data: <p %a            > 70 04 25 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
{51} normal block at 0x00000294AA083EA0, 16 bytes long.
 Data: <  #a            > 18 C0 23 61 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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