Task 38579870
| Name | JNK1_A20_A01_r3_1-QUICO_ATM_GAFF2_LOMAP_JNK1-0-5-RND4322_1 |
| Workunit | 31545034 |
| Created | 11 Dec 2025, 13:24:57 UTC |
| Sent | 11 Dec 2025, 13:24:57 UTC |
| Report deadline | 16 Dec 2025, 13:24:57 UTC |
| Received | 11 Dec 2025, 13:48:10 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 195 (0x000000C3) EXIT_CHILD_FAILED |
| Computer ID | 612458 |
| Run time | 19 min 10 sec |
| CPU time | 1 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 5,032.81 GFLOPS |
| Application version | ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121) windows_x86_64 |
| Peak working set size | 49.57 MB |
| Peak swap size | 36.09 MB |
| Peak disk usage | 2.81 GB |
Stderr output
<core_client_version>7.24.1</core_client_version>
<![CDATA[
<message>
- exit code 195 (0xc3)</message>
<stderr_txt>
21:27:24 (42356): wrapper (7.9.26016): starting
21:27:24 (42356): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A20_A01_0.pdb
QB_A20_A01_0.xml
QB_A20_A01_equil.pdb
QB_A20_A01.inpcrd
QB_A20_A01_input.yaml
QB_A20_A01_mdlambda.pdb
QB_A20_A01_min.pdb
QB_A20_A01_npt.pdb
QB_A20_A01_out_merged_nowater.pdb
QB_A20_A01.pdb
QB_A20_A01.prmtop
QB_A20_A01_sys.xml
QB_A20_A01_therm.pdb
run.bat
run.sh
21:27:25 (42356): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:27:25 (42356): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Running command git version
git version 2.47.0.windows.1
Running command git clone --filter=blob:none https://github.com/Acellera/atm.git 'C:\ProgramData\BOINC\slots\0\pip-req-build-enw9fx3h'
Cloning into 'C:\ProgramData\BOINC\slots\0\pip-req-build-enw9fx3h'...
error: RPC failed; curl 56 Recv failure: Connection was reset
error: 69 bytes of body are still expected
fetch-pack: unexpected disconnect while reading sideband packet
fatal: early EOF
fatal: fetch-pack: invalid index-pack output
fatal: could not fetch 72eafe51267c4f75d7aeda2b14cebd77291e67fc from promisor remote
warning: Clone succeeded, but checkout failed.
You can inspect what was checked out with 'git status'
and retry with 'git restore --source=HEAD :/'
error: subprocess-exited-with-error
git clone --filter=blob:none https://github.com/Acellera/atm.git 'C:\ProgramData\BOINC\slots\0\pip-req-build-enw9fx3h' did not run successfully.
exit code: 128
See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
full command: git clone --filter=blob:none https://github.com/Acellera/atm.git 'C:\ProgramData\BOINC\slots\0\pip-req-build-enw9fx3h'
cwd: [inherit]
error: subprocess-exited-with-error
git clone --filter=blob:none https://github.com/Acellera/atm.git 'C:\ProgramData\BOINC\slots\0\pip-req-build-enw9fx3h' did not run successfully.
exit code: 128
See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
python.exe: can't open file 'C:\\ProgramData\\BOINC\\slots\\0\\Scripts\\rbfe_production.exe': [Errno 2] No such file or directory
21:45:45 (42356): C:/Windows/system32/cmd.exe exited; CPU time 1.593750
21:45:45 (42356): app exit status: 0x16
21:45:45 (42356): called boinc_finish(195)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 10510839 bytes.
Dumping objects ->
{3835494} normal block at 0x0000019CECAF6780, 48 bytes long.
Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
{3835483} normal block at 0x0000019CEADD1E30, 48 bytes long.
Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
{3835472} normal block at 0x0000019CEADD24C0, 48 bytes long.
Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61
{3835461} normal block at 0x0000019CEADD2370, 48 bytes long.
Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
{3835450} normal block at 0x0000019CEADD2300, 48 bytes long.
Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61
{3835419} normal block at 0x0000019CECA4C000, 64 bytes long.
Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44
..\api\boinc_api.cpp(309) : {3835406} normal block at 0x0000019CEADCD960, 8 bytes long.
Data: < }ìœ > 00 00 7D EC 9C 01 00 00
{3833951} normal block at 0x0000019CEADCD550, 8 bytes long.
Data: <ÀR¯ìœ > C0 52 AF EC 9C 01 00 00
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x0000019CEADC4A40, 260 bytes long.
Data: < > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
{292} normal block at 0x0000019CEADBB830, 80 bytes long.
Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C
{291} normal block at 0x0000019CEADD3250, 16 bytes long.
Data: <¸<Ýêœ > B8 3C DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{290} normal block at 0x0000019CEADD2850, 16 bytes long.
Data: < <Ýêœ > 90 3C DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{289} normal block at 0x0000019CEADCE290, 32 bytes long.
Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D
{288} normal block at 0x0000019CEADD2B70, 16 bytes long.
Data: <h<Ýêœ > 68 3C DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{287} normal block at 0x0000019CEADD34D0, 16 bytes long.
Data: <@<Ýêœ > 40 3C DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{286} normal block at 0x0000019CEADD2A80, 16 bytes long.
Data: < <Ýêœ > 18 3C DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{285} normal block at 0x0000019CEADD3200, 16 bytes long.
Data: <ð;Ýêœ > F0 3B DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{284} normal block at 0x0000019CEADD2060, 48 bytes long.
Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F
{283} normal block at 0x0000019CEADD3340, 16 bytes long.
Data: < ³Ûêœ > 08 B3 DB EA 9C 01 00 00 00 00 00 00 00 00 00 00
{282} normal block at 0x0000019CEADCE0B0, 32 bytes long.
Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69
{281} normal block at 0x0000019CEADD2620, 16 bytes long.
Data: <à²Ûêœ > E0 B2 DB EA 9C 01 00 00 00 00 00 00 00 00 00 00
{279} normal block at 0x0000019CEADD3160, 16 bytes long.
Data: <¸²Ûêœ > B8 B2 DB EA 9C 01 00 00 00 00 00 00 00 00 00 00
{278} normal block at 0x0000019CEADD2C60, 16 bytes long.
Data: < ²Ûêœ > 90 B2 DB EA 9C 01 00 00 00 00 00 00 00 00 00 00
{277} normal block at 0x0000019CEADD2A30, 16 bytes long.
Data: <h²Ûêœ > 68 B2 DB EA 9C 01 00 00 00 00 00 00 00 00 00 00
{276} normal block at 0x0000019CEADD2B20, 16 bytes long.
Data: <@²Ûêœ > 40 B2 DB EA 9C 01 00 00 00 00 00 00 00 00 00 00
{275} normal block at 0x0000019CEADD2EE0, 16 bytes long.
Data: < ²Ûêœ > 18 B2 DB EA 9C 01 00 00 00 00 00 00 00 00 00 00
{274} normal block at 0x0000019CEADCE050, 32 bytes long.
Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55
{273} normal block at 0x0000019CEADD28A0, 16 bytes long.
Data: <ð±Ûêœ > F0 B1 DB EA 9C 01 00 00 00 00 00 00 00 00 00 00
{272} normal block at 0x0000019CEADBB1F0, 320 bytes long.
Data: < (Ýêœ PàÜêœ > A0 28 DD EA 9C 01 00 00 50 E0 DC EA 9C 01 00 00
{271} normal block at 0x0000019CEADD31B0, 16 bytes long.
Data: <Ð;Ýêœ > D0 3B DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{270} normal block at 0x0000019CEADD25D0, 16 bytes long.
Data: <¨;Ýêœ > A8 3B DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{269} normal block at 0x0000019CEADCE410, 32 bytes long.
Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65
{268} normal block at 0x0000019CEADD3520, 16 bytes long.
Data: < ;Ýêœ > 80 3B DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{267} normal block at 0x0000019CEADCE3B0, 32 bytes long.
Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62
{266} normal block at 0x0000019CEADD29E0, 16 bytes long.
Data: <È:Ýêœ > C8 3A DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{265} normal block at 0x0000019CEADD2C10, 16 bytes long.
Data: < :Ýêœ > A0 3A DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{264} normal block at 0x0000019CEADD3480, 16 bytes long.
Data: <x:Ýêœ > 78 3A DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{263} normal block at 0x0000019CEADD3020, 16 bytes long.
Data: <P:Ýêœ > 50 3A DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{262} normal block at 0x0000019CEADD2DA0, 16 bytes long.
Data: <(:Ýêœ > 28 3A DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{261} normal block at 0x0000019CEADD33E0, 16 bytes long.
Data: < :Ýêœ > 00 3A DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{259} normal block at 0x0000019CEADD2710, 16 bytes long.
Data: <@!Ýêœ > 40 21 DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{258} normal block at 0x0000019CEADD2140, 40 bytes long.
Data: < 'Ýêœ À¤ìœ > 10 27 DD EA 9C 01 00 00 00 C0 A4 EC 9C 01 00 00
{257} normal block at 0x0000019CEADD3110, 16 bytes long.
Data: <à9Ýêœ > E0 39 DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{256} normal block at 0x0000019CEADD28F0, 16 bytes long.
Data: <¸9Ýêœ > B8 39 DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{255} normal block at 0x0000019CEADCE7D0, 32 bytes long.
Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F
{254} normal block at 0x0000019CEADD2E90, 16 bytes long.
Data: < 9Ýêœ > 90 39 DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{253} normal block at 0x0000019CEADD3990, 992 bytes long.
Data: < .Ýêœ ÐçÜêœ > 90 2E DD EA 9C 01 00 00 D0 E7 DC EA 9C 01 00 00
{89} normal block at 0x0000019CEADCE110, 32 bytes long.
Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F
{88} normal block at 0x0000019CEADCD2D0, 16 bytes long.
Data: <  Ýêœ > A0 1E DD EA 9C 01 00 00 00 00 00 00 00 00 00 00
{87} normal block at 0x0000019CEADD1EA0, 40 bytes long.
Data: <ÐÒÜêœ áÜêœ > D0 D2 DC EA 9C 01 00 00 10 E1 DC EA 9C 01 00 00
{66} normal block at 0x0000019CEADCD140, 16 bytes long.
Data: < ê‘í÷ > 80 EA 91 ED F7 7F 00 00 00 00 00 00 00 00 00 00
{65} normal block at 0x0000019CEADCD0F0, 16 bytes long.
Data: <@é‘í÷ > 40 E9 91 ED F7 7F 00 00 00 00 00 00 00 00 00 00
{64} normal block at 0x0000019CEADCDA50, 16 bytes long.
Data: <øWŽí÷ > F8 57 8E ED F7 7F 00 00 00 00 00 00 00 00 00 00
{63} normal block at 0x0000019CEADCCFB0, 16 bytes long.
Data: <ØWŽí÷ > D8 57 8E ED F7 7F 00 00 00 00 00 00 00 00 00 00
{62} normal block at 0x0000019CEADCD640, 16 bytes long.
Data: <P Ží÷ > 50 04 8E ED F7 7F 00 00 00 00 00 00 00 00 00 00
{61} normal block at 0x0000019CEADCD280, 16 bytes long.
Data: <0 Ží÷ > 30 04 8E ED F7 7F 00 00 00 00 00 00 00 00 00 00
{60} normal block at 0x0000019CEADCD910, 16 bytes long.
Data: <à Ží÷ > E0 02 8E ED F7 7F 00 00 00 00 00 00 00 00 00 00
{59} normal block at 0x0000019CEADCD050, 16 bytes long.
Data: < Ží÷ > 10 04 8E ED F7 7F 00 00 00 00 00 00 00 00 00 00
{58} normal block at 0x0000019CEADCDBE0, 16 bytes long.
Data: <p Ží÷ > 70 04 8E ED F7 7F 00 00 00 00 00 00 00 00 00 00
{57} normal block at 0x0000019CEADCD8C0, 16 bytes long.
Data: < ÀŒí÷ > 18 C0 8C ED F7 7F 00 00 00 00 00 00 00 00 00 00
Object dump complete.
</stderr_txt>
]]>
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