Task 33799959

Name inputs_ace_pch_ms_gc_filt_af05_index_23988_to_23991-SFARR_PYSCF_ace_pch_ms_gc_filt_af05_v2-0-1-RND4115_1
Workunit 27678162
Created 2 Feb 2024, 10:30:22 UTC
Sent 2 Feb 2024, 10:45:31 UTC
Report deadline 7 Feb 2024, 10:45:31 UTC
Received 2 Feb 2024, 10:48:27 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID 614007
Run time 1 min 26 sec
CPU time 9 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 6,744.71 GFLOPS
Application version Quantum chemistry calculations on GPU v1.04 (cuda1121)
x86_64-pc-linux-gnu
Peak working set size 0.00 MB
Peak swap size 0.00 MB
Peak disk usage 0.00 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
12:45:43 (1468330): wrapper (7.7.26016): starting
12:46:48 (1468330): wrapper (7.7.26016): starting
12:46:48 (1468330): wrapper: running bin/python (bin/conda-unpack)
12:46:49 (1468330): bin/python exited; CPU time 0.277506
12:46:49 (1468330): wrapper: running bin/tar (xjvf input.tar.bz2)
12:46:50 (1468330): bin/tar exited; CPU time 0.004417
12:46:50 (1468330): wrapper: running bin/bash (run.sh)
+ echo 'Setup environment'
+ source bin/activate
++ _conda_pack_activate
++ local _CONDA_SHELL_FLAVOR
++ '[' -n x ']'
++ _CONDA_SHELL_FLAVOR=bash
++ local script_dir
++ case "$_CONDA_SHELL_FLAVOR" in
+++ dirname bin/activate
++ script_dir=bin
+++ cd bin
+++ pwd
++ local full_path_script_dir=/var/lib/boinc-client/slots/192/bin
+++ dirname /var/lib/boinc-client/slots/192/bin
++ local full_path_env=/var/lib/boinc-client/slots/192
+++ basename /var/lib/boinc-client/slots/192
++ local env_name=192
++ '[' -n '' ']'
++ export CONDA_PREFIX=/var/lib/boinc-client/slots/192
++ CONDA_PREFIX=/var/lib/boinc-client/slots/192
++ export _CONDA_PACK_OLD_PS1=
++ _CONDA_PACK_OLD_PS1=
++ PATH=/var/lib/boinc-client/slots/192/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin:.
++ PS1='(192) '
++ case "$_CONDA_SHELL_FLAVOR" in
++ hash -r
++ local _script_dir=/var/lib/boinc-client/slots/192/etc/conda/activate.d
++ '[' -d /var/lib/boinc-client/slots/192/etc/conda/activate.d ']'
+ export PATH=/var/lib/boinc-client/slots/192:/var/lib/boinc-client/slots/192/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin:.
+ PATH=/var/lib/boinc-client/slots/192:/var/lib/boinc-client/slots/192/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin:.
+ echo 'Create a temporary directory'
+ export TMP=/var/lib/boinc-client/slots/192/tmp
+ TMP=/var/lib/boinc-client/slots/192/tmp
+ mkdir -p /var/lib/boinc-client/slots/192/tmp
+ export OMP_NUM_THREADS=1
+ OMP_NUM_THREADS=1
+ export CUDA_VISIBLE_DEVICES=0
+ CUDA_VISIBLE_DEVICES=0
+ export CUPY_CUDA_LIB_PATH=/var/lib/boinc-client/slots/192/cupy
+ CUPY_CUDA_LIB_PATH=/var/lib/boinc-client/slots/192/cupy
+ echo 'Running PySCF'
+ python compute_dft.py
/var/lib/boinc-client/slots/192/lib/python3.11/site-packages/gpu4pyscf/lib/cutensor.py:174: UserWarning: using cupy as the tensor contraction engine.
  warnings.warn(f'using {contract_engine} as the tensor contraction engine.')
/var/lib/boinc-client/slots/192/lib/python3.11/site-packages/pyscf/dft/libxc.py:771: UserWarning: Since PySCF-2.3, B3LYP (and B3P86) are changed to the VWN-RPA variant, corresponding to the original definition by Stephens et al. (issue 1480) and the same as the B3LYP functional in Gaussian. To restore the VWN5 definition, you can put the setting "B3LYP_WITH_VWN5 = True" in pyscf_conf.py
  warnings.warn('Since PySCF-2.3, B3LYP (and B3P86) are changed to the VWN-RPA variant, '
/var/lib/boinc-client/slots/192/lib/python3.11/site-packages/pyscf/gto/mole.py:1280: UserWarning: Function mol.dumps drops attribute charge because it is not JSON-serializable
  warnings.warn(msg)
run.sh: line 15: 1468390 Segmentation fault      python compute_dft.py > results_log.txt
12:47:07 (1468330): bin/bash exited; CPU time 13.716412
12:47:07 (1468330): app exit status: 0x8b
12:47:07 (1468330): called boinc_finish(195)

</stderr_txt>
]]>


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