Covid-19 related WUs?

Author	Message
Beyond Send message Joined: 23 Nov 08 Posts: 1112 Credit: 6,162,416,256 RAC: 0 Level Scientific publications	Message 54082 - Posted: 26 Mar 2020, 15:08:32 UTC Is there any update on the availability of Covid-19 related WUs? ID: 54082 · Rating: 0 · rate: / Reply Quote

Keith Myers Send message Joined: 13 Dec 17 Posts: 1419 Credit: 9,119,446,190 RAC: 891 Level Scientific publications	Message 54100 - Posted: 26 Mar 2020, 23:34:16 UTC I'm sure that when those WU become available that Toni will post in the News forum and put a note on the front page. ID: 54100 · Rating: 0 · rate: / Reply Quote

Aurum Send message Joined: 12 Jul 17 Posts: 404 Credit: 17,408,899,587 RAC: 0 Level Scientific publications	Message 54120 - Posted: 27 Mar 2020, 16:43:31 UTC Maybe they already are. This simulation used ACEMD: http://youtube.com/watch?v=LlyofuzgsDo ID: 54120 · Rating: 0 · rate: / Reply Quote

Beyond Send message Joined: 23 Nov 08 Posts: 1112 Credit: 6,162,416,256 RAC: 0 Level Scientific publications	Message 54138 - Posted: 28 Mar 2020, 15:05:19 UTC - in response to Message 54120. Maybe they already are. This simulation used ACEMD: http://youtube.com/watch?v=LlyofuzgsDo That's Acellera ACEMD but probably not GPUGrid related. It shows that ACEMD can be used to help find solutions for SARS-CoV-2. ID: 54138 · Rating: 0 · rate: / Reply Quote

Aurum Send message Joined: 12 Jul 17 Posts: 404 Credit: 17,408,899,587 RAC: 0 Level Scientific publications	Message 54140 - Posted: 28 Mar 2020, 15:41:39 UTC Last modified: 28 Mar 2020, 15:46:06 UTC I'm all in favor of helping acelera. But it begs the question, what are we doing here??? Best I can tell we're running a stress test. ID: 54140 · Rating: 0 · rate: / Reply Quote

GDF Volunteer moderator Project administrator Project developer Project tester Volunteer developer Volunteer tester Project scientist Send message Joined: 14 Mar 07 Posts: 1958 Credit: 629,356 RAC: 0 Level Scientific publications	Message 54168 - Posted: 31 Mar 2020, 15:12:21 UTC - in response to Message 54138. Acellera has been doing some simulations on COVID19 using their cluster. At Acellera there are drug design people, so it is better for them to do it. GDF ID: 54168 · Rating: 0 · rate: / Reply Quote

GDF Volunteer moderator Project administrator Project developer Project tester Volunteer developer Volunteer tester Project scientist Send message Joined: 14 Mar 07 Posts: 1958 Credit: 629,356 RAC: 0 Level Scientific publications	Message 54172 - Posted: 31 Mar 2020, 15:17:53 UTC - in response to Message 54140. The simulations that we are currently running in GPUGRID are going to be used to help protein folding, including proteins coming from the virus giving COVID19. As you know this effort started before the outbreak and would last for several more months. As soon as we are able to apply the current GPUGRID database simulations to perform studies related to COVID19 we will let you know the outcome. In summary, if you are running GPUGRID now, you are contributing to a longer term project that has implications for COVID19 but it is not just specific to it. gdf ID: 54172 · Rating: 0 · rate: / Reply Quote

Jim1348 Send message Joined: 28 Jul 12 Posts: 819 Credit: 1,591,285,971 RAC: 0 Level Scientific publications	Message 54173 - Posted: 31 Mar 2020, 15:26:16 UTC - in response to Message 54172. In summary, if you are running GPUGRID now, you are contributing to a longer term project that has implications for COVID19 but it is not just specific to it. I am perfectly happy with that. There are plenty of projects on COVID-19, maybe too many are jumping on a bandwagon. Long-term projects will help catch the next virus. We will need that. I think WCG is taking a long-term view too. There is not much they can do immediately, but have an effort on finding cures for multiple viruses. Carry on. ID: 54173 · Rating: 0 · rate: / Reply Quote

Aurum Send message Joined: 12 Jul 17 Posts: 404 Credit: 17,408,899,587 RAC: 0 Level Scientific publications	Message 54179 - Posted: 31 Mar 2020, 18:11:05 UTC - in response to Message 54172. The simulations that we are currently running in GPUGRID are going to be used to help protein folding, including proteins coming from the virus giving COVID19. As you know this effort started before the outbreak and would last for several more months. gdf Sounds very interesting. Look forward to hearing more details when you're not as busy as a one-armed paperhanger. ID: 54179 · Rating: 0 · rate: / Reply Quote

ServicEnginIC Send message Joined: 24 Sep 10 Posts: 592 Credit: 11,972,186,510 RAC: 1,447 Level Scientific publications	Message 55334 - Posted: 22 Sep 2020, 8:29:10 UTC For those of you running Rosetta@home as a complementary CPU BOINC project involved in Covid-19 research, this update might be of your interest: https://boinc.bakerlab.org/rosetta/forum_thread.php?id=14226&postid=99080 ID: 55334 · Rating: 0 · rate: / Reply Quote

jiipee Send message Joined: 4 Jun 15 Posts: 19 Credit: 8,813,058,416 RAC: 114 Level Scientific publications	Message 57277 - Posted: 6 Sep 2021, 13:05:16 UTC World Community Grid has also a Covid19 project: https://www.worldcommunitygrid.org/research/opn1/overview.do It has both CPU and GPU tasks. ID: 57277 · Rating: 0 · rate: / Reply Quote

Jim1348 Send message Joined: 28 Jul 12 Posts: 819 Credit: 1,591,285,971 RAC: 0 Level Scientific publications	Message 57278 - Posted: 6 Sep 2021, 16:01:25 UTC - in response to Message 57277. World Community Grid has also a Covid19 project: They have more crunchers than they need, and a lot of people waste a lot of GPU time trying to get work. It would be better to use the GPUs on Folding (or here when there is work). As for CPUs, you can get plenty of work with an updated target, based on recent X-ray crystallography, from SiDock. https://www.sidock.si/sidock/forum_thread.php?id=140&postid=1115#1115 ID: 57278 · Rating: 0 · rate: / Reply Quote