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New application: Quantum Chemistry
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![]() Send message Joined: 12 Nov 07 Posts: 696 Credit: 27,266,655 RAC: 0 Level ![]() Scientific publications ![]() ![]() |
Hi, I've introduced a new application, called "Quantum Chemistry". We'll be using this to perform preparatory calculations on the small molecules that we simulate in our molecular dynamics simulations. This will help us to improve the quality of our simulations. This app is restricted to Linux hosts with a processor that's SSE4-capable. The first few WUs are failing, no need to report anything here just yet. I'm behind the curtain monitoring everything. Matt |
Send message Joined: 20 Jul 14 Posts: 732 Credit: 130,089,082 RAC: 0 Level ![]() Scientific publications ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Thanks for the heads-up Matt :) [CSF] Thomas H.V. Dupont Founder of the team CRUNCHERS SANS FRONTIERES 2.0 www.crunchersansfrontieres |
Send message Joined: 11 Oct 08 Posts: 1127 Credit: 1,901,927,545 RAC: 0 Level ![]() Scientific publications ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Wow, kudos to a new application! I won't be able to help with this one, but it's nice that you guys are breathing new life into the project, and I hope you find success with it :) |
![]() Send message Joined: 23 Apr 09 Posts: 3968 Credit: 1,995,359,260 RAC: 0 Level ![]() Scientific publications ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
3 days after I strip my Linux system down! SSE4 Processors: Intel Intel Penryn processors (SSE4.1 supported) Intel Nehalem processors and newer (SSE4.1, SSE4.2 and POPCNT supported) Intel Silvermont processors (SSE4.1, SSE4.2 and POPCNT supported) Intel Haswell processors and newer (SSE4.1, SSE4.2, POPCNT and LZCNT supported) AMD AMD Barcelona-based processors and newer (SSE4a, POPCNT and LZCNT supported) AMD Bulldozer-based processors and newer (SSE4a, SSE4.1, SSE4.2, POPCNT and LZCNT supported) AMD Bobcat-based processors (SSE4a, POPCNT and LZCNT supported) AMD Jaguar-based processors and newer (SSE4a, SSE4.1, SSE4.2, POPCNT and LZCNT supported) Ref: http://en.wikipedia.org/wiki/SSE4#Supporting_CPUs FAQ's HOW TO: - Opt out of Beta Tests - Ask for Help |
Send message Joined: 21 Mar 10 Posts: 23 Credit: 861,667,631 RAC: 0 Level ![]() Scientific publications ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
OK, I"m running 3 Linux hosts. My check of /proc/cpuinfo seems to indicate that two of three are sse4 capabile. Is this particular app required both (sse4 cpu and a GPU), or sse4 cpu only. And did just one user get all those Quantum Chemistry "jobs", or does the server only count users when tasks are completed? |
![]() Send message Joined: 23 Apr 09 Posts: 3968 Credit: 1,995,359,260 RAC: 0 Level ![]() Scientific publications ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
The app is called Linux running on an AMD x86_64 or Intel EM64T CPU and it's an (mt) version. See GPUGrid's apps (mt) means Multi Thread, so it is an mt CPU app. Don't know if also requires a GPU or not, or what type of GPU that might be (the other mt app is for CPU + AMD GPU), but the AMD mt app is described as Molecular Dynamics for CPU and AMD GPUs, whereas this app is just described as Quantum Chemistry. There is nothing in the server status page to indicate. FAQ's HOW TO: - Opt out of Beta Tests - Ask for Help |
![]() Send message Joined: 12 Nov 07 Posts: 696 Credit: 27,266,655 RAC: 0 Level ![]() Scientific publications ![]() ![]() |
The app is called Linux running on an AMD x86_64 or Intel EM64T CPU and it's an (mt) version. That's it. No GPU, no Windows. Also, it will only go to hosts with px capable of SSE4.2 and POPCNT. Matt |
Send message Joined: 3 Sep 14 Posts: 152 Credit: 918,557,369 RAC: 19,063 Level ![]() Scientific publications ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
<core_client_version>7.4.8</core_client_version> <![CDATA[ <message> Maximum disk usage exceeded </message> <stderr_txt> </stderr_txt> ]]> x3. Log: "Exceeded disk limit: 294.80MB > 286.10MB". Free space: 128GB, no restrictions for boinc (max disk usage: 128GB). What the hell? :( |
Send message Joined: 11 Jul 09 Posts: 1639 Credit: 10,159,968,649 RAC: 295,172 Level ![]() Scientific publications ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
<core_client_version>7.4.8</core_client_version> <![CDATA[ <message> Maximum disk usage exceeded </message> <stderr_txt> </stderr_txt> ]]> The disk usage limit is set in the <workunit> definition, as <rsc_disk_bound>300000000.000000</rsc_disk_bound> or whatever. In other words, it's set on the server, by the server operators. Nothing to do with your local settings. |
![]() Send message Joined: 17 Aug 08 Posts: 2705 Credit: 1,311,122,549 RAC: 0 Level ![]() Scientific publications ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Intel Intel Nehalem processors and newer (SSE4.1, SSE4.2 and POPCNT supported) This makes it easy: anything "Core ix" will do. This includes Nehalem, Westmere, Sandy Bridge, Ivy Bridge, Haswell, Broadwell, Skylake and whatever comes next (Cannonlake). This includes all mobile and Xeon versions of them. Anything "Core 2" or older doesn't have the features. MrS Scanning for our furry friends since Jan 2002 |
Send message Joined: 3 Sep 14 Posts: 152 Credit: 918,557,369 RAC: 19,063 Level ![]() Scientific publications ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Thx :) |
Send message Joined: 21 Mar 10 Posts: 23 Credit: 861,667,631 RAC: 0 Level ![]() Scientific publications ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Any word on getting more of the Quantum Chemistry jobs into the queue? |
![]() Send message Joined: 12 Nov 07 Posts: 696 Credit: 27,266,655 RAC: 0 Level ![]() Scientific publications ![]() ![]() |
Any word on getting more of the Quantum Chemistry jobs into the queue? Coming soon Matt |
Send message Joined: 3 Sep 14 Posts: 152 Credit: 918,557,369 RAC: 19,063 Level ![]() Scientific publications ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Any word on getting more of the Quantum Chemistry jobs into the queue? Any new info? |
Send message Joined: 10 Sep 10 Posts: 163 Credit: 388,132 RAC: 0 Level ![]() Scientific publications ![]() |
:-( |
Send message Joined: 10 Sep 10 Posts: 163 Credit: 388,132 RAC: 0 Level ![]() Scientific publications ![]() |
No quantum chemistry this year.... |
Send message Joined: 16 Nov 18 Posts: 2 Credit: 401,581,215 RAC: 0 Level ![]() Scientific publications ![]() ![]() ![]() |
Hello = I've been contributing to another project for 7 years, which doesn't use GPU. I decided to share one Ubuntu machine with GPUGRID to allow my nice GPU to be utilized. However, Quantum Chemistry just came back and told me it needed over 57Gb's to get started. ?? I have dual-zeon's in several boxes, running 32 multithreaded WorldWide Community Grid tasks at once, and have never needed more than 10Gb's for everything. Why so much, or is there a problem? Thanks= rbclark47 |
![]() Send message Joined: 26 Feb 14 Posts: 211 Credit: 4,496,324,562 RAC: 0 Level ![]() Scientific publications ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Go to GPU Preferences on your account page and unclick use the CPU. Quantum Chemistry are CPU based work units that require 4 threads per task and over 58GB space on your HD. If you have no desire to do these that is the best way. There are some GPU work unit around but you will need to specify in the GPU Preferences which kind of GPU you have..ie Nvidia or ATI. and then decided if you want short or long run units. ![]() ![]() |
Send message Joined: 16 Nov 18 Posts: 2 Credit: 401,581,215 RAC: 0 Level ![]() Scientific publications ![]() ![]() ![]() |
Many THanks! rbclark47 |
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