WU: FXArep

Message boards : News : WU: FXArep
Message board moderation

To post messages, you must log in.

1 · 2 · Next

AuthorMessage
noelia

Send message
Joined: 5 Jul 12
Posts: 35
Credit: 393,375
RAC: 0
Level

Scientific publications
wat
Message 33461 - Posted: 11 Oct 2013, 14:16:34 UTC

Hi all,

I have just sent a good bunch of WU (4000) to the long queue. Only two steps, 90000 credits each. With the analysis of this last batch, we will be able to finish a project on drug discovery for the thrombosis disease. Please let me know if you find any problem, although these simulations were already on the long queue some moths ago and should run fine.

Noelia
ID: 33461 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
GPUGRID

Send message
Joined: 12 Dec 11
Posts: 91
Credit: 2,730,095,033
RAC: 0
Level
Phe
Scientific publications
watwatwatwatwatwatwatwatwatwatwatwatwat
Message 33463 - Posted: 11 Oct 2013, 18:22:59 UTC - in response to Message 33461.  

With the analysis of this last batch, we will be able to finish a project on drug discovery for the thrombosis disease.

Thank you for that info. It´s always good to know what we are working on. It really keep us, the donors, motivated.
ID: 33463 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Jacob Klein

Send message
Joined: 11 Oct 08
Posts: 1127
Credit: 1,901,927,545
RAC: 0
Level
His
Scientific publications
watwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwat
Message 33489 - Posted: 14 Oct 2013, 0:35:01 UTC - in response to Message 33463.  

I agree, thanks for providing the info Noelia!

Also, with MJH's app fixes, my system is able to suspend/resume your tasks without problems. I'm looking forward to getting more of your tasks, which is not something I thought I'd ever be saying :)

Keep up the good work.
ID: 33489 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Profile Retvari Zoltan
Avatar

Send message
Joined: 20 Jan 09
Posts: 2380
Credit: 16,897,957,044
RAC: 193,866
Level
Trp
Scientific publications
watwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwat
Message 33496 - Posted: 14 Oct 2013, 11:32:47 UTC

Did anybody received any workunit from this batch?
I don't. I've checked the top 10 hosts, and they didn't received any.
There is something going on with the scheduler, or the batch priorities.
ID: 33496 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Profile skgiven
Volunteer moderator
Volunteer tester
Avatar

Send message
Joined: 23 Apr 09
Posts: 3968
Credit: 1,995,359,260
RAC: 0
Level
His
Scientific publications
watwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwat
Message 33497 - Posted: 14 Oct 2013, 12:07:15 UTC - in response to Message 33496.  
Last modified: 14 Oct 2013, 12:10:59 UTC

I checked through all the tasks I've run since the 11th of this month, but I have not run any of Noelia's FXArep WU's. I'm just running Long WU's but I don't think they would have been in the short queue (no complaints).

The Long queue has about 5,700 WU's in it, so perhaps the FAXrep work has just not surfaced yet?
FAQ's

HOW TO:
- Opt out of Beta Tests
- Ask for Help
ID: 33497 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
TJ

Send message
Joined: 26 Jun 09
Posts: 815
Credit: 1,470,385,294
RAC: 0
Level
Met
Scientific publications
watwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwat
Message 33498 - Posted: 14 Oct 2013, 13:58:28 UTC

I am still hoping for a Noelia WU, especially on the 660 but all I get are Santi's and occasionally a Nathan.
Reading Noelia's first post, there should be 4000 of them, thus 1700 are others.
Doing change calculations, we should get Noelia's more.
Greetings from TJ
ID: 33498 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
John C MacAlister

Send message
Joined: 17 Feb 13
Posts: 181
Credit: 144,871,276
RAC: 0
Level
Cys
Scientific publications
watwatwatwatwatwatwatwatwatwatwatwatwat
Message 33499 - Posted: 14 Oct 2013, 15:59:33 UTC

No Noelias for me: I am happy with what I have received over the weekend - seven long tasks processed with no issues. :)
ID: 33499 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Profile nate

Send message
Joined: 6 Jun 11
Posts: 124
Credit: 2,928,865
RAC: 0
Level
Ala
Scientific publications
watwatwatwatwat
Message 33505 - Posted: 15 Oct 2013, 8:49:04 UTC

Some NOELIA WUs should start to trickle in now. There was an issue with the priority of certain tasks in the scheduler. Fixed now.
ID: 33505 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Speedy

Send message
Joined: 19 Aug 07
Posts: 46
Credit: 42,791,082
RAC: 34,367
Level
Val
Scientific publications
watwatwatwatwatwatwat
Message 33529 - Posted: 17 Oct 2013, 7:12:22 UTC - in response to Message 33461.  

Hi all,

I have just sent a good bunch of WU (4000) to the long queue. Only two steps, 90000 credits each.
Noelia

It is wonderful to hear that you/we have found a drug for thrombosis disease. Can somebody please explain to me what is meant by these 4000 tasks only having 2 steps?
ID: 33529 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Stefan
Project administrator
Project developer
Project tester
Project scientist

Send message
Joined: 5 Mar 13
Posts: 348
Credit: 0
RAC: 0
Level

Scientific publications
wat
Message 33530 - Posted: 17 Oct 2013, 10:01:56 UTC - in response to Message 33529.  
Last modified: 17 Oct 2013, 10:03:13 UTC

@Speedy
Well, simulating drugs for a disease doesn't mean we have found a good one or cured it yet :)
The number of steps is usually related to the length of the single simulations. With grids like GPUGRID we can run multiple (4000 here) simulations in parallel but the problem is that we cannot run them for too long because people need to use their machines (and the chance that they may crash increases with time).
So if we want to run them for a bit longer we split them into steps. Thus one guy does the first piece of a simulation and another guy finished it.
The more pieces the longer the simulation but also the longer it takes for us to get back our results as the steps need to run sequentially.
Technically for our users I think it's of little significance how many steps the simulations consist of.
ID: 33530 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Profile Retvari Zoltan
Avatar

Send message
Joined: 20 Jan 09
Posts: 2380
Credit: 16,897,957,044
RAC: 193,866
Level
Trp
Scientific publications
watwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwat
Message 33531 - Posted: 17 Oct 2013, 10:38:32 UTC

I still haven't received any workunits from this batch...
I had some potxnnn-NOELIA_INS1P, but these are from a different batch.
ID: 33531 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
TJ

Send message
Joined: 26 Jun 09
Posts: 815
Credit: 1,470,385,294
RAC: 0
Level
Met
Scientific publications
watwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwat
Message 33532 - Posted: 17 Oct 2013, 14:54:36 UTC - in response to Message 33531.  

I still haven't received any workunits from this batch...
I had some potxnnn-NOELIA_INS1P, but these are from a different batch.

Same here Zoltan, only 3 Noelia WU's in the last week, all 3 potx. They run fine by the way, with 94-96% GPU use so very efficient use of graphics board.
Greetings from TJ
ID: 33532 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Stefan
Project administrator
Project developer
Project tester
Project scientist

Send message
Joined: 5 Mar 13
Posts: 348
Credit: 0
RAC: 0
Level

Scientific publications
wat
Message 33533 - Posted: 17 Oct 2013, 15:12:22 UTC

We have tried to fix it but we need to do some more investigation on how the scheduler works. They will eventually be sent out, it's just that they were set on low priority to begin with.
ID: 33533 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Speedy

Send message
Joined: 19 Aug 07
Posts: 46
Credit: 42,791,082
RAC: 34,367
Level
Val
Scientific publications
watwatwatwatwatwatwat
Message 33534 - Posted: 17 Oct 2013, 20:24:38 UTC

Thanks for your answer Stefan
ID: 33534 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
GPUGRID

Send message
Joined: 12 Dec 11
Posts: 91
Credit: 2,730,095,033
RAC: 0
Level
Phe
Scientific publications
watwatwatwatwatwatwatwatwatwatwatwatwat
Message 33540 - Posted: 18 Oct 2013, 13:14:47 UTC

I have got the first ones today. Let´s crunch them away!
ID: 33540 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Profile skgiven
Volunteer moderator
Volunteer tester
Avatar

Send message
Joined: 23 Apr 09
Posts: 3968
Credit: 1,995,359,260
RAC: 0
Level
His
Scientific publications
watwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwat
Message 33542 - Posted: 18 Oct 2013, 15:21:16 UTC - in response to Message 33540.  

Running one now on a 770.

The previous SDOERR_AdaptVillinWW9 task used less memory (165MB), GPU usage was ~80% and power was 65%
The FXArep WU uses 481MB (good news for some), has GPU usage of 92% and it's power requirements are at 77% (noteworthy for those on an OC).


FAQ's

HOW TO:
- Opt out of Beta Tests
- Ask for Help
ID: 33542 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Profile Beyond
Avatar

Send message
Joined: 23 Nov 08
Posts: 1112
Credit: 6,162,416,256
RAC: 0
Level
Tyr
Scientific publications
watwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwat
Message 33544 - Posted: 19 Oct 2013, 1:52:23 UTC

None of the current Noelias will run properly on a GTX 460/768. The Santi and Nathans run fine but I can't get any :-(
ID: 33544 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
wiyosaya

Send message
Joined: 22 Nov 09
Posts: 114
Credit: 589,114,683
RAC: 0
Level
Lys
Scientific publications
watwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwat
Message 33545 - Posted: 19 Oct 2013, 2:26:12 UTC
Last modified: 19 Oct 2013, 2:26:31 UTC

I have just had a couple die on my 580.

This one crashed completely - http://www.gpugrid.net/workunit.php?wuid=4854487
This one crashed, too, but there is no indication to the server that it died - http://www.gpugrid.net/workunit.php?wuid=4854479

Are these, perhaps, to problematic to be in the field?
ID: 33545 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
Profile nenym

Send message
Joined: 31 Mar 09
Posts: 137
Credit: 1,429,587,071
RAC: 177,579
Level
Met
Scientific publications
watwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwatwat
Message 33546 - Posted: 19 Oct 2013, 5:13:34 UTC

Tasks runs fine on 560Ti and 260.
ID: 33546 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
petebe

Send message
Joined: 19 Nov 12
Posts: 31
Credit: 1,549,545,867
RAC: 0
Level
His
Scientific publications
watwatwatwatwatwatwatwatwatwatwat
Message 33548 - Posted: 19 Oct 2013, 12:42:32 UTC

Running ok on my 660ti's.
ID: 33548 · Rating: 0 · rate: Rate + / Rate - Report as offensive     Reply Quote
1 · 2 · Next

Message boards : News : WU: FXArep

©2025 Universitat Pompeu Fabra